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Duelling resource requirements of esvee and bwa_mem

enhancementNew feature or requestNew feature or request

Status: Open.

#283 In nf-core/oncoanalyser;

· oneillkza opened on Apr 7, 2026

Please document gnomad and clinvar annotation versions

enhancementNew feature or requestNew feature or request

Status: Open.

#282 In nf-core/oncoanalyser;

· oneillkza opened on Apr 2, 2026

Redux 1.2 fails consistently on graph genomes

bugSomething isn't workingSomething isn't working

Status: Open.

#281 In nf-core/oncoanalyser;

· alexiswl opened on Apr 2, 2026

Add support for RNA CRAM input

enhancementNew feature or requestNew feature or request

Status: Open.

#279 In nf-core/oncoanalyser;

· oneillkza opened on Mar 23, 2026

Improve handling of metadata and multiple samples

enhancementNew feature or requestNew feature or request

Status: Open.

#275 In nf-core/oncoanalyser;

· scwatts opened on Feb 5, 2026

Patient with 2 donors

enhancementNew feature or requestNew feature or request

Status: Open.

#274 In nf-core/oncoanalyser;

· mwe-bixeng opened on Feb 5, 2026

Support for multiple tumor samples per patient (longitudinal and multi-region) in a single run

enhancementNew feature or requestNew feature or request

Status: Open.

#249 In nf-core/oncoanalyser;

· peteryzheng opened on Sep 11, 2025

Known issues

Status: Open.

#177 In nf-core/oncoanalyser;

· scwatts opened on Apr 5, 2025

Support ARM64/AArch64 architecture

enhancementNew feature or requestNew feature or request

Status: Open.

#139 In nf-core/oncoanalyser;

· scwatts opened on Mar 3, 2025

Add vCHORD to oncoanalyser for HRD detection in targeted mode

enhancementNew feature or requestNew feature or request

Status: Open.

#118 In nf-core/oncoanalyser;

· bounlu opened on Dec 6, 2024

Make circos plots optional in the orange report

enhancementNew feature or requestNew feature or request

Status: Open.

#113 In nf-core/oncoanalyser;

· bounlu opened on Nov 29, 2024

Add documentation describing workflow design choices

enhancementNew feature or requestNew feature or request

Status: Open.

#84 In nf-core/oncoanalyser;

· scwatts opened on Aug 7, 2024