Discussions

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  Description of results

  KeepCalmAndRushB started May 21, 2024 in Ideas · Closed

  

  

  

  

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  Astral Phospho Questions

  JackLeerson asked Nov 14, 2025 in Questions / Support · Unanswered

  

  

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  how to use the .config file?

  JM-Bader started Apr 4, 2024 in Ideas · Closed

  

  

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  Better control for File loading

  JM-Bader started Apr 4, 2024 in Ideas · Closed

  

  

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  Not Valid DIA Data ERROR

  jbettinger91 asked Jun 6, 2025 in Questions / Support · Unanswered

  

  

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  Converting to DiaNN .tsv library format

  Arthfael asked Aug 21, 2025 in Questions / Support · Unanswered

  

  

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  For each run, a TIC vs time plot

  KeepCalmAndRushB started May 21, 2024 in Ideas · Closed

  

  

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  LC and MS methods

  KeepCalmAndRushB started May 21, 2024 in Ideas · Closed

  

  

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  Add some more values to the summary stat.tsv table

  KeepCalmAndRushB started May 21, 2024 in Ideas · Closed

  

  

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  AlphaDIA crash

  JM-Bader started Apr 15, 2024 in Show and tell · Closed

  

  

  

  

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  Having a hard time reproducing benchmarks against Spectronaut & DIA-NN

  bsphinney asked May 12, 2025 in Questions / Support · Unanswered

  

  

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  make a pipeline mode

  JM-Bader started Apr 4, 2024 in Ideas

  

  

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  parallel search feature requests for Linux

  machth started Feb 5, 2025 in Ideas

  

  

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  Notification for out-of-memory error

  enhancement New feature or request location:gui

  JuliaS92 started Jan 30, 2025 in Ideas

  

  

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  speclib.mbr.hdf vs speclib.hdf

  LoayJabre asked Dec 15, 2024 in Questions / Support · Closed · Answered

  

  

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  default config.yaml

  LoayJabre asked Dec 13, 2024 in Questions / Support · Closed · Answered

  

  

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  log file with time duration

  JM-Bader started Apr 4, 2024 in Ideas · Closed

  

  

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  spectral library formats

  rednaSander asked Nov 15, 2024 in Questions / Support · Unanswered

  

  

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  restructure precursor output table

  JM-Bader started Nov 18, 2024 in Ideas

  

  

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  Advised / supported hardware

  APAJanssen asked Nov 6, 2024 in Questions / Support · Closed · Answered

  

  

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  Add library prediction from sequence list

  wahlema started Aug 20, 2024 in Ideas

  

  

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  PG CVs higher than DIANN

  ZCohenBPM started Aug 15, 2024 in General

  

  

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  stat.tsv counts differ strongly from DIA-NN results

  tobiasko started Jun 19, 2024 in General

  

  

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  Questions about Multiplexing feature

  GNMiller0114 started Jun 21, 2024 in General

  

  

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  very small number of peptides are found in alphaDIA if one uses empirical library from MS Fragger

  Yanidzilla started Jun 7, 2024 in General · Closed

  

  

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