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1. sleep_scoring sleep_scoring Public

   Desktop app for scoring mouse sleep from EEG, EMG, and norepinephrine recordings — visualize, auto-score with a neural network, correct by hand, and export sleep statistics.

   Python 7 1

2. vessel-diameter-and-pulsatility-analysis-app vessel-diameter-and-pulsatility-analysis-app Public

   An app to calculate and visualize blood vessel diameter and area as functions of time, given .tif, .lif, or .mat files

   MATLAB 1

3. fp_analysis fp_analysis Public

   Desktop app for fiber photometry analysis — visualize multichannel recordings and export perievent statistics (AUC, peaks, decay time) to spreadsheets.

   Python 2

4. biosignal_preprocessing_app biosignal_preprocessing_app Public

   Provides a unified pipeline under a simple GUI to extract and synchronize biosignals including EEG, EMG, and fiberphotometry data recorded by TDT, Viewpoint, or Pinnacle., and outputs a .mat file.

   MATLAB 1

5. mouse-pupil-analysis mouse-pupil-analysis Public

   A mouse pupil size analysis pipeline in a single line of command. Works well in low-contrast and low-resolution frames.

   Python 1 2

6. BrainFlowZZZ_metadata_wizard BrainFlowZZZ_metadata_wizard Public

   MATLAB 1