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GARD is not running

Status: Open.

#1972 In veg/hyphy;

· Akademik77 opened on Mar 11, 2026

Molerate foreground assignment

Status: Open.

#1971 In veg/hyphy;

· qitingcai opened on Mar 8, 2026

Inquiry on GARD : Nucleotides vs aminoacid breakpoints differences.

Status: Open.

#1969 In veg/hyphy;

· Sasa-won-keuns-lab opened on Mar 6, 2026

Question: Interpretation of MEME Table Output (FEL Metrics, Beta Values, LRT Calculation) + Total Branch Length = 0 (No Runtime Errors)

Status: Open.

#1967 In veg/hyphy;

· wxijia03 opened on Mar 1, 2026

Inquiry about Hyphy Vision

Status: Open.

#1966 In veg/hyphy;

· Sasa-won-keuns-lab opened on Feb 28, 2026

I saw the changes… but HyPhy said ‘no selection’

Status: Open.

#1963 In veg/hyphy;

· biozhajie opened on Feb 25, 2026

Inconsistencies in Ka/Ks estimation ?

Status: Open.

#1960 In veg/hyphy;

· ga01 opened on Feb 11, 2026

Setting a batch analysis for single alignment-wide ω

Status: Open.

#1955 In veg/hyphy;

· desmodus1984 opened on Jan 31, 2026

RELAX error

Status: Open.

#1953 In veg/hyphy;

· omario7777 opened on Jan 28, 2026

Internal error in _List* _TheTree::RecoverAncestralSequences

Status: Open.

#1944 In veg/hyphy;

· myrmecobrian opened on Dec 27, 2025

Datamonkey Fails to Recognize The Test Branches Selected

Status: Open.

#1934 In veg/hyphy;

· Sa1amanda opened on Dec 5, 2025