transmission-electron-microscopy

The software ReciPro makes various crystallographic calculations, visualizes a crystal structure, simulates diffraction patterns and TEM image, indexes diffraction spots, plots stereographic projection, and so on.

Python wrapper for the scripting interface of Thermo Fisher Scientific and FEI microscopes.

Dr. Probe command-line tools for HR-(S)TEM image simulation

Control and Automation of Transmission Electron Microscopes

AuRaCh - Automated Radiation Chemistry Simulations

Unsupervised Deep Video Denoising for TEM Dataset

A MATLAB codebase to analyze TEM images of soot, which includes new methods associated with this project and a compilation of other pre-existing methods into a single package.

A flexibility upgrade for multi-channel scanning transmission electron microscopy

Related codes for Generative learning of morphological and contrast heterogeneities for self-supervised electron micrograph segmentation

A collection of C++ source code modules for forward and inverse simulations of Unified Tomographic Reconstruction.

PITIP(PITIP Is a TEM Image Processor)

Single atom imaging with time-resolved electron microscopy

Electron optics simulation and design

A Digital Micrograph Script to collect three-dimension electron diffraction data.

A plugin for the Xicam scientific data visualization and analysis software. Developed by the National Center for Electron Microscopy (NCEM).

A python package to measure lens aberration from experimental contrast transfer functions (CTFs).

Electron microscopy scripts not associated with any specific publications.

A Python codebase to analyze TEM images of soot, which includes new methods associated with this project and a compilation of other pre-existing methods into a single package.

Example files for (S)TEM simulation w/ Dr Probe and abTEM

Research, CV, Resume