A large scale off-target analysis tool for CRISPR/Cas9 genome editing system
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Jul 24, 2017 - Perl
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off-target
Here are 9 public repositories matching this topic...
Software UART for AVR microcontrollers
avr library state-machine simulation emulation atmega32 atmega328p archive uart avr-gcc interrupts atmega serial-port off-target serial-communication atmega2560 rs-232 software-serial
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Feb 17, 2026 - C
Commands, scripts, and data for reanalysis of "Unexpected mutations after CRISPR–Cas9 editing in vivo"
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Oct 14, 2017 - HTML
Source-aware benchmark and validation-priority resource for high-mismatch genome-editing off-target prioritization.
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Jul 28, 2026 - Python
MMIO stub library for off-target embedded unit tests
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Jul 14, 2025 - C++
Commensal-sparing CRISPR guide design — target one bacterium, spare the microbiome. Narrow-spectrum, strain-selective, in-browser, free.
synthetic-biology client-side crispr igem microbiome off-target genome-editing sgrna cas12a grna-design narrow-spectrum strain-selective commensal-sparing spcas9 crispr-antimicrobial
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Jun 30, 2026 - Python
Local CRISPR-Cas9 guide off-target scanner. Core PAM scan verified correct via property testing against 500 random sequences; added a bound on max_mismatches to prevent degenerate output near the random-match noise floor.
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Aug 5, 2026 - Python
CE-specific qPCR primer design pipeline: Primer3 + pair-wise BLAST against genome & curated RefSeq mRNA to select junction-spanning assays.
python bioinformatics pandas biopython blast junction qpcr ncbi-blast off-target primer-design primer3 splicing-analyses in-silico-pcr cryptic-exon
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Apr 26, 2026 - Python
UART module for AVR microcontrollers
avr library simulation atmega328p archive uart avr-gcc interrupts atmega serial-port off-target serial-communication rs-232
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Apr 11, 2026 - C
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