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Backport PR #2466 on branch 0.12.x (docs: Mention anndataR in interoperability section) #2467

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Merged
ilan-gold merged 1 commit into from
Jun 5, 2026
Merged

Backport PR #2466 on branch 0.12.x (docs: Mention anndataR in interoperability section) #2467

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1 change: 1 addition & 0 deletions docs/interoperability.md
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Expand Up @@ -6,6 +6,7 @@ language of choice:

## R

- [anndataR](https://anndatar.scverse.org/) allows reading and writing `AnnData` objects stored in HDF5 and Zarr (v2 and v3) formats. Conversion functions to `Seurat` and `SingleCellExperiment` are also provided.
- [zellkonverter](https://bioconductor.org/packages/release/bioc/html/zellkonverter.html) zellkonverter provides basilisk based tooling for loading from `h5ad` files to `SingleCellExperiment`
- [anndata](https://anndata.dynverse.org) provides an R implementation of `AnnData` as well as IO for the HDF5 format.
- [MuData](https://bioconductor.org/packages/release/bioc/html/MuData.html) provides IO for `AnnData` and `MuData` stored in HDF5 to Bioconductor's `SingleCellExperiment` and `MultiAssayExperiment` objects.
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