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Fix quantify (models) for non-Osprey-gLCM #837

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Fix quantify (models) for non-Osprey-gLCM #837

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26 changes: 13 additions & 13 deletions quantify/OspreyQuantify.m
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Original file line number Diff line number Diff line change
Expand Up @@ -1304,21 +1304,21 @@
if ~strcmp(MRSCont.opts.fit.method, 'LCModel') && ~strcmp(MRSCont.opts.fit.method, 'Osprey_gLCM')
subspecs = size(MRSCont.fit.results.metab.fitParams,3);
mmmodels = size(MRSCont.fit.results.metab.fitParams,1);
models = 1;
voxels = 1;
experiments = 1;
elseif strcmp(MRSCont.opts.fit.method, 'Osprey_gLCM')
subspecs = size(MRSCont.fit.results.metab,3);
mmmodels = size(MRSCont.fit.results.metab,1);
experiments = size(MRSCont.fit.results.metab,4);
models = size(MRSCont.fit.results.metab,5);
voxels = 1;
else
subspecs = 1;
mmmodels = 1;
models = 1;
voxels = 1;
experiments = 1;
else if strcmp(MRSCont.opts.fit.method, 'Osprey_gLCM')
subspecs = size(MRSCont.fit.results.metab,3);
mmmodels = size(MRSCont.fit.results.metab,1);
experiments = size(MRSCont.fit.results.metab,4);
models = size(MRSCont.fit.results.metab,5);
voxels = 1;
else
subspecs = 1;
mmmodels = 1;
models = 1;
voxels = 1;
experiments = 1;
end
end
if ~(strcmp(qtfyType, 'AlphaCorrWaterScaled') || strcmp(qtfyType, 'AlphaCorrWaterScaledGroupNormed'))
if ~(strcmp(qtfyType, 'amplMets') || strcmp(qtfyType, 'CRLB') ||strcmp(qtfyType, 'h2oarea') ||strcmp(qtfyType, 'indirect') )
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