v2.1.1

See changelog at https://pep.databio.org/looper/changelog/

v2.1.0

See changelog at https://pep.databio.org/looper/changelog/

v2.0.3 Release

[2.0.3] -- 2025-09-23

Fixed

• Fixed #543
• Fixed #547
• Fixed #548

v2.0.2

[2.0.2] -- 2025-09-22

Changed

• Remove veracitools dependency from the requirements.

v2.0.1

[2.0.1] -- 2025-03-05

Changed

• update ubiquerg>=0.8.1

Fixed

• #541

v2.0.0

[2.0.0] -- 2025-01-16

This release breaks backwards compatibility for Looper versions < 2.0.0

Fixed

• divvy init #520
• replaced deprecated PEPHubClient function, _load_raw_pep with .load_raw_pep
• looper cli parameters now take priority as originally intended #518
• fix divvy inspect
• remove printed dictionary at looper finish #511
• fix #536
• fix #522
• fix #537
• fix #534

Changed

• --looper-config is now --config, -c. #455
• A pipeline interface now consolidates a sample_interface and a project_interface #493
• Updated documentation for Looper 2.0.0, removing previous versions pepspec PR #34
• remove position based argument for divvy config, must use --config or run as default config

Added

• looper init tutorial #466
• looper config allows for pephub_path in pipestat config section of .looper.yaml #519
• improve error messaging for bad/malformed looper configurations #515
• add shortform argument for --package (alias is now -p)

v2.0.0a3

2.0.0a3 pre-release

v2.0.0a2

[2.0.0a2] -- 2024-09-30

This release breaks backwards compatibility for Looper versions < 2.0.0

Fixed

• divvy init #520
• replaced deprecated PEPHubClient function, _load_raw_pep with .load_raw_pep
• looper cli parameters now take priority as originally intended #518
• fix divvy inspect
• remove printed dictionary at looper finish #511

Changed

• --looper-config is now --config, -c. #455
• A pipeline interface now consolidates a sample_interface and a project_interface #493
• Updated documentation for Looper 2.0.0, removing previous versions pepspec PR #34
• remove position based argument for divvy config, must use --config or run as default config

Added

• looper init tutorial #466
• looper config allows for pephub_path in pipestat config section of .looper.yaml #519
• improve error messaging for bad/malformed looper configurations #515
• add shortform argument for --package (alias is now -p)

v1.9.1 release

[1.9.1] -- 2024-07-18

Changed

• ensure peppy requirement peppy>=0.40.0,<=0.40.2

v2.0.0a1

v2.0.0a1 pre-release