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Update schemes.py#70

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Update schemes.py#70
dudzicp wants to merge 1 commit intooxpig:masterfrom
dudzicp:patch-1

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@dudzicp dudzicp commented Oct 25, 2023

Updated smooth insertions logic as in case of cterm smoothing insertions were converted to matches causing downstream problems (e.g. in kabat alignment)

Updated smooth insertions logic as in case of cterm smoothing insertions were converted to matches causing downstream problems (e.g. in kabat alignment)
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dudzicp commented Oct 25, 2023

@broncio123 can you look into this?

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dudzicp commented Oct 26, 2023

As an example, investigate the following sequence: QSVLTQPPSVSEAPRQRVTITCSGSSSNIGNNAVNWYQQLPGKAPKLLINAADRCPRILMRCKQDSDCLAGCVCGPNGFCGTNSGVPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNNWVFGGGTKVTVL numbered in kabat scheme.

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