Repositories list

• Blurring_Person_CORCAN

  Public
  This script detects persons and heads in videos, tracks them across frames, fills short detection gaps by interpolation, and applies anonymization (pixelation b…

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 1, 2026Sep 1, 2026

• bovine-behavior-inference

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Aug 20, 2026Aug 20, 2026

• Forecasting_App

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 7, 2026Jul 7, 2026

• fangio

  Public
  Adds movement indices to behavior experiment videos (matlab)

  MATLAB

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 11, 2026Jun 11, 2026

• AnnotationManualCorrection

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 4, 2026Jun 4, 2026

• siWalk

  Public
  Python

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jun 3, 2026Jun 3, 2026

• Registration-Modules

  Public
  Two modules for stall registration and bounding box alignment.

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 22, 2026May 22, 2026

• Stall-Point-Selection-Coordinate-Scaling

  Public
  Tool to interactively select the 4 corners of an animal stall on the first video frame, then normalize bounding box coordinates relative to the stall geometry.

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 22, 2026May 22, 2026

• Bounding-Box-Preprocessing

  Public
  Preprocessing modules for spatially filtering and reorganising cattle body-part detections prior to HMM-based behaviour analysis.

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 22, 2026May 22, 2026

• KmerSignificanceScore

  Public
  Jupyter Notebook

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 4, 2026May 4, 2026

• Identification-Tracking-Cows

  Public
  This project provides a complete pipeline for detecting, tracking, identifying, and analyzing cows in videos. It is designed to support behavioral research and …

  Jupyter Notebook

  •00 forks•11 star•00 issues•00 pull requests•Updated Apr 24, 2026Apr 24, 2026

• cow-detection-and-identification-model

  Public
  Jupyter Notebook

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Feb 16, 2026Feb 16, 2026

• TOUCAN

  Public
  Supervised learning for fungal BGC discovery

  Python

  •

  MIT License

  •00 forks•66 stars•22 issues•1212 pull requests•Updated Nov 11, 2025Nov 11, 2025

• MultiPatchFormer

  Public
  Official Implementation of the MultiPatchFormer: A multiscale model for multivariate time series forecasting

  Python

  •66 forks•1919 stars•11 issue•00 pull requests•Updated Oct 22, 2025Oct 22, 2025

• Bi-iGRU

  Public
  A bi-directional cross-channel RNN model for time-series forecasting of dairy production

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 17, 2025Sep 17, 2025

• OLMS

  Public
  OptimalLocalMinSearch

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 15, 2025Aug 15, 2025

• backprojector

  Public
  MATLAB

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 25, 2025Jun 25, 2025

• matrid

  Public
  manual tracking and identification software (matlab)

  MATLAB

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 25, 2025Jun 25, 2025

• Caribou

  Public
  Alignment-free bacterial identification and classification in metagenomics sequencing data using machine learning

  machine-learningalignment-freebacterial-genomes+ 2

  machine-learningalignment-freebacterial-genomesclassification-modelsbacteria-classification

  Python

  •

  MIT License

  •11 fork•33 stars•00 issues•00 pull requests•Updated May 19, 2025May 19, 2025

• ArcticFox

  Public
  Python

  •

  Other

  •11 fork•00 stars•00 issues•00 pull requests•Updated Mar 9, 2025Mar 9, 2025

• mytest

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 25, 2025Feb 25, 2025

• UL33

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jan 7, 2025Jan 7, 2025

• ontos

  Public
  Ruby

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 19, 2024Dec 19, 2024

• dairy-farmers-detection-and-blurring-model

  Public
  Dairy farmers detection and identification model using YOLOv7

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 3, 2024Sep 3, 2024

• dairy_biomarkers

  Public
  Ensemble supervised learning approach to discover discriminative biomarkers that predict dairy cow welfare.

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 20, 2024Aug 20, 2024

• Bioinfo-Workshops

  Public
  Bioinfo-Workshops hosts hands-on tutorials and exercises covering NGS analysis, R programming, Linux basics, and more in bioinformatics.

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 18, 2024Jun 18, 2024

• synchronization-of-w-videos-

  Public
  Jupyter Notebook

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jun 18, 2024Jun 18, 2024

• Canadian-cropland-dataset-github

  Public
  This repository houses a novel patch-based dataset compiled using optical satellite images of Canadian agricultural croplands retrieved from Sentinel-2.

  Python

  •

  MIT License

  •77 forks•4545 stars•11 issue•00 pull requests•Updated Jul 17, 2023Jul 17, 2023

• the-canadian-cropland-dataset-website

  Public
  Ruby

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 14, 2023Jul 14, 2023

• methylc-seq

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jun 6, 2023Jun 6, 2023