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    17 repositories

    • CCRRBL-19

      Public
      HTML
      •0•0•0•0•Updated Feb 16, 2026Feb 16, 2026

    • scCHyMErA-Seq

      Public
      Code repository for scCHyMErA-Seq project
      Python
      •0•0•0•0•Updated Jan 8, 2026Jan 8, 2026

    • FLEXIS

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 30, 2025Oct 30, 2025

    • Dockers

      Public
      A repository of recipes for Docker containers built for the NCI-RBL
      dockercontainers
      C
      •3•2•1•0•Updated Sep 19, 2025Sep 19, 2025

    • .github

      Public
      Public GitHub Profile
      MIT License
      •0•0•0•0•Updated Sep 10, 2025Sep 10, 2025

    • RNA-seek

      Public
      A comprehensive quality-control and quantification RNA-seq pipeline
      Python
      •
      MIT License
      •13•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • iCLIP_V3

      Public
      Stable release for iCLIP V3
      Nextflow
      •1•0•0•0•Updated Jul 31, 2024Jul 31, 2024

    • RBL-14

      Public
      Characterize miRNA-bound chimera reads in AGO2 CLASH
      0•0•0•0•Updated Feb 8, 2024Feb 8, 2024

    • iCLIP

      Public
      RNA Biology Pipeline to Characterize protein-RNA Interactions
      HTML
      •
      MIT License
      •2•5•5•0•Updated May 25, 2023May 25, 2023

    • MOP2-Pipeline

      Public
      A pipeline for the RBL to run Master Of Pores 2 on the FRCE cluster
      0•0•0•0•Updated Nov 8, 2022Nov 8, 2022

    • Wu_tRNA_seq

      Public
      Analysis of tRNAseq data from the Colin Wu lab using mimseq (mim-tRNASeq) toolkit.
      0•0•0•0•Updated Jul 29, 2022Jul 29, 2022

    • 4SUseq

      Public
      Analysis of 4SU labeled (and unlabeled) total RNA samples.
      pipelineanalysisrnaseqvariant-calling4suseq
      Python
      •1•1•0•0•Updated Oct 20, 2021Oct 20, 2021

    • RBL_RBL3

      Public
      CCBR related projects
      Python
      •0•1•0•0•Updated Jul 30, 2021Jul 30, 2021

    • CLIP_Analysis_Soyeong

      Public
      HTML
      •0•0•2•0•Updated Feb 1, 2021Feb 1, 2021

    • ONT_RNAseq

      Public
      ONT RNAseq analysis (cDNA)
      Python
      •
      MIT License
      •0•0•0•0•Updated Nov 23, 2020Nov 23, 2020

    • RNAediting_pipeline

      Public
      HTML
      •0•0•0•0•Updated Oct 6, 2020Oct 6, 2020

    • 3-_End_Identification

      Public
      0•0•0•0•Updated Sep 30, 2020Sep 30, 2020