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6 repositories

T2GD
Public
Transcriptome-space to genome-space BAM conversion. One static binary, 36 subcommands, no dependencies.
python bioinformatics rna-seq
python bioinformatics rna-seq nanopore dlang sam genome-annotation bam transcriptome splice-junctions
Python
•
Other
•0•0•0•0•Updated Aug 19, 2026Aug 19, 2026
Yomics
Public
Deep yeast transcriptomic analysis
R
•0•0•0•0•Updated Jul 7, 2026Jul 7, 2026
INDEGRA
Public
Accurate, easy and integrated suit to compare RNA samples with different degradation levels, quantify decay rates per-transcript and correct for degradation-ind…
bioinformatics computational-biology rna
bioinformatics computational-biology rna transcriptomics rna-seq-analysis differential-gene-expression rna-seq-pipeline rna-seq-quantification rna-degradome
Python
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Other
•0•8•0•0•Updated Jun 3, 2026Jun 3, 2026
FracFixR
Public
A compositional statistical framework for absolute proportion estimation between fractions in RNA sequencing data
R
•
Other
•0•0•2•0•Updated Jun 1, 2026Jun 1, 2026
VX
Public
AI-agent-controllable desktop genome and transcriptome viewer. Native MCP server (43 tools) and embedded HTTP API let LLM assistants observe, drive, and analyse…
visualization bioinformatics opengl
visualization bioinformatics opengl nanopore mcp dlang vcf desktop-application bigwig gtf
Python
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Other
•0•3•1•0•Updated May 20, 2026May 20, 2026
taggen
Public
High-Performance Barcode Generator and Demultiplexer for High-Throughput and Long-Read Sequencing Applications
D
•
MIT License
•0•0•0•0•Updated May 16, 2026May 16, 2026

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6 repositories

T2GD

Yomics

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VX

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