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Add troubleshooting section about tmp mounted as noexec#2505

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sbesson merged 7 commits intoome:developfrom
sbesson:tmp_no_exec
Feb 15, 2026
Merged

Add troubleshooting section about tmp mounted as noexec#2505
sbesson merged 7 commits intoome:developfrom
sbesson:tmp_no_exec

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@sbesson sbesson commented Dec 2, 2025

Fixes #2502

Describes the symptoms/exceptions on import/reading, the workarounds when using older versions of OMERO.server/OMERO.py and the versions of the components which resolve this issue

Note that while we have a version of OMERO.py including the fix for this issue, the next release of OMERO.server including these patches won't be released until Q1 2026. Deferring to the OME UoD and GerBI teams on whether we should aim to have a troubleshooting section and amend it when the new release is up or wait for this to be included alongside the next OMERO release

/cc @jburel @joshmoore @pwalczysko

Describe the symptoms/exceptions on import/reading, the
workarounds when using older versions of OMERO.server/OMERO.py and
the versions of the components which resolve this issue
@sbesson sbesson requested a review from pwalczysko January 20, 2026 13:43
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Reads well and formatting and building lgtm. 3 suggestions above for minor typos and reformulations. Thank you.

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@sbesson Are you happy for me to merge this ? I did not go ahead just because of

we should aim to have a troubleshooting section and amend it when the new release is up or wait for this to be included alongside the next OMERO release

from the header of this PR. Quite frankly, I do not understand the sentence. I think you have just added helpfully a troubleshooting section, thanks.

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sbesson commented Jan 21, 2026

@pwalczysko the issue described in the new section will be resolved by an upgrade to OMERO.server 5.6.17 which is yet-to-be-released. I think it's fine to merge as it is but I would probably aim for it to go live around the same time as the release.

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aim for it to go live around the same time as the release.

OK, I will not merge it yet.

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sbesson commented Feb 15, 2026

Merging in preparation of the release tomorrow

@sbesson sbesson merged commit 62c0f76 into ome:develop Feb 15, 2026
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@github-project-automation github-project-automation bot moved this from Todo to Done in OMERO.server 5.6.17 Feb 15, 2026
@sbesson sbesson deleted the tmp_no_exec branch February 16, 2026 09:32
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Document issues with /tmp partition mounted as noexec

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