Update usage.md

[ppflrs]

Fixed typo (L248: contamiation -> contamination) on usage.md

PR checklist

• This comment contains a description of changes (with reason).
• If you've fixed a bug or added code that should be tested, add tests!
• If you've added a new tool - have you followed the pipeline conventions in the contribution docs
• If necessary, also make a PR on the nf-core/ampliseq branch on the nf-core/test-datasets repository.
• Make sure your code lints (nf-core pipelines lint).
• Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
• Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
• Usage Documentation in docs/usage.md is updated.
• Output Documentation in docs/output.md is updated.
• CHANGELOG.md is updated.
• README.md is updated (including new tool citations and authors/contributors).

[github-actions]

This PR is against the master branch ❌

• Do not close this PR
• Click Edit and change the base to dev
• This CI test will remain failed until you push a new commit

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Hi @ppflrs,

It looks like this pull-request is has been made against the ppflrs/ampliseq master branch.
The master branch on nf-core repositories should always contain code from the latest release.
Because of this, PRs to master are only allowed if they come from the ppflrs/ampliseq dev branch.

You do not need to close this PR, you can change the target branch to dev by clicking the "Edit" button at the top of this page.
Note that even after this, the test will continue to show as failing until you push a new commit.

Thanks again for your contribution!

[d4straub]

Thanks! However, we are not working on the master branch but the dev branch. Could you please base the change on the dev branch and open a PR to dev? You are welcome to change that directly here in this PR, of course.

[ppflrs]

Thanks! However, we are not working on the master branch but the dev branch. Could you please base the change on the dev branch and open a PR to dev? You are welcome to change that directly here in this PR, of course.

Hi Daniel, thanks for the heads-up I have changed the branch to dev. I hope this works. Thanks!

[d4straub]

Thanks!