All issues

Search results

Question: Acquiring pre-trained and fine-tuned model weights

Status: Open.

#31 In mims-harvard/TxGNN;

· tim-stocker opened on Jul 9, 2026

Question: why are non-drug-disease edges split into train/valid/test if they aren't scored during evaluation?

Status: Open.

#30 In mims-harvard/TxGNN;

· arshjotSDSC opened on Jul 3, 2026

checkpoints reproduce at 0.032 mean AUPRC vs 0.437 published (13.7x gap)

Status: Open.

#29 In mims-harvard/TxGNN;

· monk1337 opened on Apr 2, 2026

Problem about detailed content of testset

Status: Open.

#28 In mims-harvard/TxGNN;

· Nero-gitg opened on Sep 3, 2025

Code for explainability

Status: Open.

#27 In mims-harvard/TxGNN;

· Catriona-Miller opened on Jul 28, 2025

Data API is not working

Status: Open.

#26 In mims-harvard/TxGNN;

· JARACH-209 opened on Jul 17, 2025

AUPRC lower than reported using provided pretrained weights

Status: Open.

#25 In mims-harvard/TxGNN;

· Masaaaato opened on May 26, 2025

Specific Version Numbers

Status: Open.

#24 In mims-harvard/TxGNN;

· shloknatarajan opened on May 13, 2025

Model evaluation inconsistency between runs

Status: Open.

#23 In mims-harvard/TxGNN;

· xinmengZ opened on Apr 24, 2025

How to plot Fig.1D?

Status: Open.

#22 In mims-harvard/TxGNN;

· Leafaeolian opened on Apr 11, 2025

Evaluation Metric

Status: Open.

#21 In mims-harvard/TxGNN;

· maggielee1111 opened on Feb 19, 2025

Model architecture

Status: Open.

#20 In mims-harvard/TxGNN;

· OnkarMulay opened on Nov 28, 2024