sbmlsim is a collection of python utilities to simplify simulations with SBML models implemented on top of roadrunner. Source code is available from https://github.com/matthiaskoenig/sbmlsim.
Features include among others
- simulation experiments
- simulation reports
- parameter fitting
- sensitivity analysis
If you have any questions or issues please open an issue.
sbmlutils is available from pypi and can be installed via
pip install sbmlsimThe latest develop version can be installed via
pip install git+https://github.com/matthiaskoenig/sbmlsim.git@develop- Source Code: MIT
- Documentation: CC BY-SA 4.0
Matthias König is supported and by the German Research Foundation (DFG) within the Research Unit Programme FOR 5151 "QuaLiPerF (Quantifying Liver Perfusion-Function Relationship in Complex Resection - A Systems Medicine Approach)" by grant number 436883643 and by grant number 465194077 (Priority Programme SPP 2311, Subproject SimLivA).
Matthias König was supported by the Federal Ministry of Education and Research (BMBF, Germany) within the research network Systems Medicine of the Liver (LiSyM, grant number 031L0054).
© 2019-2026 Matthias König