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feat: merged predict table with CSV, TSV or Parquet output
enhancementNew feature or requestNew feature or requestStatus: Open.#245 In instadeepai/winnow;feat: accept parquet InstaNovo predictions
enhancementNew feature or requestNew feature or requestStatus: Open.#244 In instadeepai/winnow;refactor: end calibration-feature pickle support
refactorCode cleanup and architectural improvementsCode cleanup and architectural improvementsStatus: Open.#243 In instadeepai/winnow;fix: align InstaNovo tests with the default beam token log-probabilities prefix
bugSomething isn't workingSomething isn't workingStatus: Open.#242 In instadeepai/winnow;refactor:
DatabaseGroundedFDRControl.fitmutates its input DataFramerefactorCode cleanup and architectural improvementsCode cleanup and architectural improvementsStatus: Open.#228 In instadeepai/winnow;docs: Add PAASTA Bioinformatics Summer School 2026 notebook
documentationImprovements or additions to documentationImprovements or additions to documentationStatus: Open.#216 In instadeepai/winnow;Update the getting_started_with_winnow notebook
documentationImprovements or additions to documentationImprovements or additions to documentationStatus: Open.#215 In instadeepai/winnow;docs: add Winnow logo to README
documentationImprovements or additions to documentationImprovements or additions to documentationStatus: Open.#209 In instadeepai/winnow;docs: Add license for pretrained model
documentationImprovements or additions to documentationImprovements or additions to documentationStatus: Open.#208 In instadeepai/winnow;- Status: Open.#197 In instadeepai/winnow;
- Status: Open.#193 In instadeepai/winnow;
Feat: Add precursor ion signal percentage feature
enhancementNew feature or requestNew feature or requestStatus: Open.#145 In instadeepai/winnow;