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@hurwitzlab

Hurwitz Lab

Repository of the lab of Bonnie Hurwitz (UA)

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  1. elm-imicrobe-spa elm-imicrobe-spa Public

    Elm 10 4

  2. docker-mothur docker-mothur Public

    Docker image for running mothur.

    Makefile 4

  3. appetizer appetizer Public

    Create the app.json for Stampede

    Elm 4 1

  4. biosys-analytics biosys-analytics Public

    BE434/535 Biosystems Analytics

    Python 3 37

  5. planet-microbe-functional-annotation planet-microbe-functional-annotation Public

    Python 3

  6. phage_detection_benchmarks phage_detection_benchmarks Public

    Code used to benchmark metagenomic phage detection tools.

    Python 3 1

Repositories

Showing 10 of 258 repositories
  • brc_hazel_training Public

    Repository to share the materials from the BRZ Hazel training with the attendees.

    hurwitzlab/brc_hazel_training’s past year of commit activity
    HTML 1 MIT 0 0 0 Updated Jan 21, 2026
  • metag_topic_modeling Public

    topic modeling approaches for metagenomics

    hurwitzlab/metag_topic_modeling’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Dec 5, 2025
  • vaginal_genome_assembly Public

    assembly for vaginal genomes from Dr. Melissa Herbst-Kralovetz

    hurwitzlab/vaginal_genome_assembly’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 1 Updated Nov 11, 2025
  • hurwitzlab.github.io Public

    Website for the Hurwitz Lab

    hurwitzlab/hurwitzlab.github.io’s past year of commit activity
    CSS 0 MIT 0 0 0 Updated Oct 22, 2025
  • fmt_viruses Public

    detecting viruses in FMT

    hurwitzlab/fmt_viruses’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated May 23, 2025
  • be434-Spring2025 Public
    hurwitzlab/be434-Spring2025’s past year of commit activity
    Python 0 MIT 25 0 3 Updated May 3, 2025
  • install_chapel_hpc Public
    hurwitzlab/install_chapel_hpc’s past year of commit activity
    Shell 0 MIT 0 0 0 Updated Apr 23, 2025
  • 2025_find_viruses Public

    viral pipeline

    hurwitzlab/2025_find_viruses’s past year of commit activity
    Jupyter Notebook 0 MIT 6 0 0 Updated Apr 22, 2025
  • be487-fall-2024 Public

    metagenomics 487/587

    hurwitzlab/be487-fall-2024’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 17, 2025
  • CI2025 Public

    Applied Cyberinfrastructure course at UA

    hurwitzlab/CI2025’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jan 27, 2025
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