GitHub - clauswilke/structural_prediction_of_ER: Code and data for Shahmoradi et al., Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design, J. Mol. Evol. 79:130–142 (2014).

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Name		Name	Last commit message	Last commit date
Latest commit History 230 Commits
bfactors		bfactors
correlation_analysis		correlation_analysis
crystal_rsa		crystal_rsa
entropies		entropies
evolutionary_rates		evolutionary_rates
homologous_structures		homologous_structures
manuscript		manuscript
molecular_dynamics		molecular_dynamics
protein_design		protein_design
src		src
README.txt		README.txt

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Raw data and analysis scripts to obtain them are in the following folders:
- crystal_rsa
- homologous_structures
- protein_design
- bfactors
- entropies
- evolutionary_rates
- molecular_dynamics

All analyses comparing multiple quantities, as well as all figures,
are in this folder:
- correlation_analysis

The manuscript is in this folder:
- manuscript

About

Code and data for Shahmoradi et al., Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design, J. Mol. Evol. 79:130–142 (2014).

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