Bugfix/sorting bam files#18

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JenniferNeumaier wants to merge 2 commits into

bugfix/sorting_bam_files

Commits on Apr 9, 2026

fixed issue in 03_index that required a sorted bam file before indexing
JenniferNeumaier
committed

Commits on Apr 10, 2026

added fix to handle automatic sorting of bam files were created by STAR alignment
JenniferNeumaier
committed