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QSIPrep stuck at eddy - Docker (Windows)

bugSomething isn't workingSomething isn't working

Status: Open.

#1052 In PennLINC/qsiprep;

· Anomandaris-Purake opened on May 21, 2026

Missing dependency eddy_cuda10.2

bugSomething isn't workingSomething isn't working

Status: Open.

#1051 In PennLINC/qsiprep;

· kellychang4 opened on May 7, 2026

Add ability to re-use anatomical derivatives

enhancementNew feature or requestNew feature or request

Status: Open.

#1048 In PennLINC/qsiprep;

· tsalo opened on May 5, 2026

TOPUP not running on AP/PA data

bugSomething isn't workingSomething isn't working

Status: Open.

#1047 In PennLINC/qsiprep;

· 36000 opened on Apr 24, 2026

susceptibility correction method

enhancementNew feature or requestNew feature or request

Status: Open.

#1038 In PennLINC/qsiprep;

· joseph-schwartz1999 opened on Mar 25, 2026

reportlets with part-mag get ignored when assembling the subject report.

bugSomething isn't workingSomething isn't working

Status: Open.

#1037 In PennLINC/qsiprep;

· bpinsard opened on Mar 20, 2026

Use tolerances for affine matrix differences to allow for floating point errors

enhancementNew feature or requestNew feature or request

Status: Open.

#1036 In PennLINC/qsiprep;

· tsalo opened on Mar 17, 2026

Lesion mask not reoriented to LPS

bugSomething isn't workingSomething isn't working

Status: Open.

#1023 In PennLINC/qsiprep;

· rbakker opened on Jan 30, 2026

Missing xxhash module to run synthseg and synthstrip

bugSomething isn't workingSomething isn't working

Status: Open.

#1022 In PennLINC/qsiprep;

· lucile-hashimoto opened on Jan 23, 2026

HTML report - enhanced view of the DWI to T1w coregistration

enhancementNew feature or requestNew feature or request

Status: Open.

#1018 In PennLINC/qsiprep;

· samuelholly opened on Jan 13, 2026

B0 Field Mapping in HTML Report

bugSomething isn't workingSomething isn't working

Status: Open.

#1015 In PennLINC/qsiprep;

· sofiechung opened on Dec 10, 2025

Update boilerplate

Status: Open.

#1010 In PennLINC/qsiprep;

· araikes opened on Dec 2, 2025