Single-cell meta-analyses reveal responses of tumor-reactive CXCL13⁺ T cells to immune-checkpoint blockade

This repository contains the scripts for producing the quantitative results in our paper.

Contact

Please contact us:
Baolin Liu: [email protected]
Zemin Zhang: [email protected]

Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
04.tumor.specific.T.abundance		04.tumor.specific.T.abundance
06.clustering		06.clustering
08.CD4.tumor.specific.T.abundance		08.CD4.tumor.specific.T.abundance
09.CD4.tumor.specific.clustering		09.CD4.tumor.specific.clustering
10.CXCL13.expr		10.CXCL13.expr
11.tumor.reactive.clone.classification		11.tumor.reactive.clone.classification
01.TCR.clone.classification.R		01.TCR.clone.classification.R
02.TCR.specificity.R		02.TCR.specificity.R
03.our.data.R		03.our.data.R
03.our.data.heatmap.R		03.our.data.heatmap.R
04.startrac.expansion.R		04.startrac.expansion.R
05.HNSCC.data.analysis.R		05.HNSCC.data.analysis.R
07.clonal.revival.R		07.clonal.revival.R
LICENSE		LICENSE
README.md		README.md