Search results

Protein identification discrepancy

Status: Open.

#2650 In Nesvilab/FragPipe;

· SamueldelaCamaraFuentes opened on Jan 28, 2026

SpecLib Problem w/ FP24

Status: Open.

#2649 In Nesvilab/FragPipe;

· jjGG opened on Jan 27, 2026

Export matched fragments (and batch spectra export) not reporting c- and z-ions

Status: Open.

#2647 In Nesvilab/FragPipe;

· iahendriks opened on Jan 26, 2026

SILAC-TMT hyperplex

Status: Open.

#2625 In Nesvilab/FragPipe;

· JohnSuberu opened on Jan 16, 2026

write sub-mzml files for timstof data

Status: Open.

#2592 In Nesvilab/FragPipe;

· jd690764 opened on Dec 12, 2025

PTM Assignment in Combined Peptide Results

Status: Open.

#2584 In Nesvilab/FragPipe;

· KZ-MS opened on Dec 8, 2025

Metadata-aware MBR

Status: Open.

#2564 In Nesvilab/FragPipe;

· leonardblaschek opened on Nov 25, 2025

example output data

Status: Open.

#2551 In Nesvilab/FragPipe;

· mffrank opened on Nov 20, 2025

Metaproteomics module test execution problem

Status: Open.

#2541 In Nesvilab/FragPipe;

· MiguelCos opened on Nov 13, 2025

O-Pair

Status: Open.

#2522 In Nesvilab/FragPipe;

· peteythecat1 opened on Oct 29, 2025

Fragpipe V23.1 crashes with DDA+ in hybrid DIA

Status: Open.

#2520 In Nesvilab/FragPipe;

· NikolaMonteverde opened on Oct 29, 2025

IonQuant can now quantify DIA data?

Status: Open.

#2512 In Nesvilab/FragPipe;

· LKittinun opened on Oct 25, 2025