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- Status: Open.#17 In DKFZ-ODCF/reference-data;
- Status: Open.#16 In DKFZ-ODCF/reference-data;
Add cellranger mkref (cellranger indeces)
enhancementNew feature or requestNew feature or requestStatus: Open.#15 In DKFZ-ODCF/reference-data;Create multi-species genomes (hybrids, xenograft)
enhancementNew feature or requestNew feature or requestStatus: Open.#14 In DKFZ-ODCF/reference-data;Add creation of bowtie2 index
enhancementNew feature or requestNew feature or requestStatus: Open.#13 In DKFZ-ODCF/reference-data;Use kubernetes to run pipeline, instead of a static VM.
enhancementNew feature or requestNew feature or requestStatus: Open.#12 In DKFZ-ODCF/reference-data;Idea: Use snakemake-incudes to define subroutines in the pipeline (and conditionally execute)
enhancementNew feature or requestNew feature or requestStatus: Open.#7 In DKFZ-ODCF/reference-data;List of files to be generated for OTP
enhancementNew feature or requestNew feature or requestStatus: Open.#6 In DKFZ-ODCF/reference-data;- Status: Open.#5 In DKFZ-ODCF/reference-data;
Define a Snakemake report template
enhancementNew feature or requestNew feature or requestStatus: Open.#4 In DKFZ-ODCF/reference-data;