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chore: 🤖 sync copilot instructions - 2026-08-12 TechDev-project #117: Pull request #429 opened by ccbr-bot Bot
10s update-copilot-instructions
update-copilot-instructions
10s
PR #429 CodeQL #558: by ccbr-bot Bot
58s refs/pull/429/head
refs/pull/429/head
58s
Scheduled CodeQL #557: by github-advanced-security AI
1m 5s dev
dev
1m 5s
docs: 🤖 update readme for nciccbr/ccbr_atacseq:v13-feat TechDev-project #116: Pull request #427 opened by github-actions Bot
Action required auto-pr/master_images/ccbr_atacseq/Dockerfile.v13
auto-pr/master_images/ccbr_atacseq/Dockerfile.v13
Action required
fix(atacseq): add ragg build dependencies for tidyverse install build-docker-auto #480: Commit fb24fc1 pushed by kopardev
55m 9s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
55m 9s
build-docker master_images/ccbr_atacseq/Dockerfile.v13-feat build-docker-manual #177: Manually run by kopardev
51m 50s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
51m 50s
build-docker master_images/ccbr_atacseq/Dockerfile.v13-feat build-docker-manual #176: Manually run by kopardev
23m 8s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
23m 8s
feat(ccbr_atacseq): add tidyverse to CRAN package install list build-docker-auto #479: Commit 27e0dc7 pushed by kopardev
25m 12s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
25m 12s
feat(ccbr_atacseq): add org.Bt.eg.db alongside TxDb.Btaurus.UCSC.bosT… build-docker-auto #478: Commit 641711f pushed by kopardev
2m 25s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
2m 25s
fix(ccbr_atacseq): install libuv1-dev/libcairo2-dev; fail build if R … build-docker-auto #477: Commit 3fbcdec pushed by kopardev
39m 59s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
39m 59s
build-docker master_images/ccbr_atacseq/Dockerfile.v13-feat build-docker-manual #175: Manually run by kopardev
34m 30s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
34m 30s
feat(ccbr_atacseq): merge chrR rDNA annotation into T2T-CHM13v2.0 TxDb build-docker-auto #476: Commit 62b34da pushed by kopardev
8m 7s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
8m 7s
fix(ccbr_atacseq): ship pre-built T2T-CHM13v2.0 TxDb instead of build… build-docker-auto #475: Commit fb575c6 pushed by kopardev
41m 35s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
41m 35s
chore: add .gitignore for local kopardevn folder history file build-docker-auto #474: Commit 296b3f2 pushed by kopardev
41m 33s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
41m 33s
fix(ccbr_atacseq): correct CRAN apt repo suffix from cran44 to cran40 build-docker-auto #473: Commit 4d7bfa9 pushed by kopardev
43m 20s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
43m 20s
fix(ccbr_atacseq): harden apt-get update against flaky archive.ubuntu… build-docker-auto #472: Commit 599cf64 pushed by kopardev
27m 1s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
27m 1s
fix(ccbr_atacseq): use curl|gpg --dearmor for CRAN key in Dockerfile.v13 build-docker-auto #471: Commit f8f4fb8 pushed by kopardev
8m 53s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
8m 53s
fix(ccbr_atacseq): use HTTPS wget for CRAN GPG key in Dockerfile.v13 build-docker-auto #470: Commit 1ef8d26 pushed by kopardev
1m 40s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
1m 40s
chore(ccbr_atacseq): rename Dockerfile.v12 to failing.Dockerfile.v12 build-docker-auto #469: Commit 761ff4f pushed by kopardev
16s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
16s
feat(ccbr_atacseq): add Dockerfile.v13 — fresh build from v8 base wit… build-docker-auto #468: Commit 8b0dd89 pushed by kopardev
1m 46s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
1m 46s
fix(ccbr_atacseq): use apt-key add for CRAN R4.4 GPG key on Ubuntu 20.04 build-docker-auto #467: Commit 16c8771 pushed by kopardev
3m 47s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
3m 47s
fix(ccbr_atacseq): upgrade R to 4.4 in v12 RUN layer for BiocT2T support build-docker-auto #466: Commit b73a793 pushed by kopardev
3m 5s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
3m 5s
fix(ccbr_atacseq): install BiocT2T from GitHub to bypass old Biocondu… build-docker-auto #465: Commit f5205cd pushed by kopardev
2m 3s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
2m 3s
fix(ccbr_atacseq): rebase Dockerfile.v12 on v1.10 to avoid max layer … build-docker-auto #464: Commit ef8bb64 pushed by kopardev
21m 14s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
21m 14s
fix(ccbr_atacseq): base Dockerfile.v12 on v11-feat tag build-docker-auto #463: Commit 7a8962b pushed by kopardev
2m 8s feature/atacseq_master_autobuild
feature/atacseq_master_autobuild
2m 8s