pgb/index.html at main · CAST-genomics/pgb · GitHub

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<!DOCTYPE html>
<html lang="en">
<head>
  <title>PGB - Pangenome Browser</title>
  <meta charset="utf-8">
  <meta name="viewport" content="width=device-width, user-scalable=no, minimum-scale=1.0, maximum-scale=1.0">
  <link rel="icon" type="image/x-icon" href="/favicon.ico">
  <!-- Bootstrap CSS -->
  <link href="https://cdn.jsdelivr.net/npm/bootstrap@5.3.2/dist/css/bootstrap.min.css" rel="stylesheet">
  <!-- Bootstrap Icons -->
  <link href="https://cdn.jsdelivr.net/npm/bootstrap-icons@1.11.1/font/bootstrap-icons.css" rel="stylesheet">
  <!-- Bootstrap JS Bundle with Popper -->
  <script src="https://cdn.jsdelivr.net/npm/bootstrap@5.3.2/dist/js/bootstrap.bundle.min.js"></script>

  <style>
    #info-button {
      color: #6c757d !important;
    }
    #info-button:hover {
      border: 1px solid #6c757d !important;
      border-radius: 0.375rem;
    }
  </style>

  <script type="module" src="src/main.js"></script>
</head>
<body class="vh-100 w-100 m-0 p-0" style="overflow: hidden;">
  <nav class="navbar navbar-expand-lg navbar-light bg-light">
    <div class="container-fluid">
      <a class="navbar-brand" href="#">PGB</a>
      <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbarNav">
        <span class="navbar-toggler-icon"></span>
      </button>
      <div class="collapse navbar-collapse" id="navbarNav">
        <div id="pgb-locus-input-container" class="mx-auto w-50"></div>
        <div class="navbar-nav ms-auto d-flex align-items-center" style="gap: 2rem; margin-left: 2rem;">
          <button type="button" class="btn btn-link" id="info-button" data-bs-toggle="popover" data-bs-placement="bottom" data-bs-content="Loading..." data-bs-title="Release Information">
            <i class="bi bi-info-circle"></i>
          </button>
        </div>
      </div>
    </div>
  </nav>
  <div class="h-100 w-100">
    <div id="pgb-widget-container" class="widget-container">
      <!-- Widget buttons will be dynamically inserted here by WidgetService -->
    </div>
    <div id="pgb-gear-card" class="assembly-widget__card card position-absolute" style="display: none;">
      <div class="card-header">
        <h5 class="card-title mb-0">Assembly</h5>
      </div>
      <div class="card-body p-0">
        <div class="p-3 border-bottom">
          <div class="input-group">
            <span class="input-group-text">
              <i class="bi bi-search"></i>
            </span>
            <input type="text" class="form-control" id="assembly-search" placeholder="Search assemblies..." aria-label="Search assemblies">
          </div>
        </div>
        <div class="assembly-widget__list-container">
          <div class="list-group list-group-flush">
          </div>
        </div>
      </div>
      <div class="card-footer">
        <div class="d-flex align-items-center gap-3">
          <div class="form-check form-switch assembly-widget__switch">
            <input class="form-check-input form-check-input-lg" type="checkbox" role="switch">
          </div>
          <span id="emphasis-mode-label" class="assembly-widget__mode-label">Subgraph</span>
        </div>
      </div>
    </div>

    <div id="pgb-superpopulation-card" class="superpopulation-widget__card card position-absolute" style="display: none;">
      <div class="card-header">
        <h5 class="card-title mb-0">Population</h5>
      </div>
      <div class="card-body">
        <div class="superpopulation-widget__list-container">
          <div class="list-group list-group-flush">
          </div>
        </div>
      </div>
    </div>

    <div id="pgb-pca-card" class="pca-widget__card card position-absolute" style="display: none;">
      <div class="card-header">
        <h5 class="card-title mb-0">PCA</h5>
      </div>
      <div class="card-body p-0">
        <div class="p-3 border-bottom">
          <div class="input-group">
            <span class="input-group-text">
              <i class="bi bi-search"></i>
            </span>
            <input type="text" class="form-control" id="pca-search" placeholder="Search assemblies..." aria-label="Search assemblies">
          </div>
        </div>
        <div class="assembly-widget__list-container">
          <div class="list-group list-group-flush">
          </div>
        </div>
      </div>
    </div>


    <div class="h-100 w-100">
      <div class="w-100 pgb-gene-annotation-track-container">
        <canvas class="h-100 w-100 pgb-gene-annotation-track-container__canvas"></canvas>
      </div>
      <div id="pgb-three-container" class="h-100 w-100 position-relative flex-grow-1">
      </div>
    </div>
  </div>
</body>
</html>