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@CAST-genomics

Center for Admixture Science and Technology

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  1. haptools haptools Public

    Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis

    Python 24 5

Repositories

Showing 10 of 15 repositories
  • pgb Public

    Interactive Pangenome Graph Visualization App

    CAST-genomics/pgb’s past year of commit activity
    JavaScript 0 0 0 0 Updated Apr 17, 2026
  • panCT Public

    Our pangenome analysis toolkit

    CAST-genomics/panCT’s past year of commit activity
    Python 2 0 3 4 Updated Apr 14, 2026
  • pangenome-api Public
    CAST-genomics/pangenome-api’s past year of commit activity
    Python 0 0 0 0 Updated Mar 25, 2026
  • pipsort Public
    CAST-genomics/pipsort’s past year of commit activity
    C++ 4 AGPL-3.0 0 0 0 Updated Jan 22, 2026
  • haptools Public

    Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis

    CAST-genomics/haptools’s past year of commit activity
    Python 24 MIT 5 11 (1 issue needs help) 3 Updated Dec 15, 2025
  • CAST-genomics.github.io Public

    CAST website

    CAST-genomics/CAST-genomics.github.io’s past year of commit activity
    HTML 0 2 0 0 Updated Nov 14, 2025
  • pgb-mvp Public Forked from turner/pg-spike-pan-zoom

    DEPRICATED - pangenome browser mvp

    CAST-genomics/pgb-mvp’s past year of commit activity
    JavaScript 0 2 0 1 Updated Sep 1, 2025
  • hla_haplotypes Public
    CAST-genomics/hla_haplotypes’s past year of commit activity
    0 0 0 0 Updated Mar 4, 2025
  • personal-genomics-textbook Public

    Textbook for CSE284: Personal Genomics

    CAST-genomics/personal-genomics-textbook’s past year of commit activity
    Jupyter Notebook 2 MIT 1 1 1 Updated Oct 27, 2024
  • snakemake-gfa-complexity Public
    CAST-genomics/snakemake-gfa-complexity’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jul 2, 2024
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