NeuronProofreader is a Python library for automated proofreading of split and merge mistakes in neuron reconstructions.

Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas

spatial transcriptomics analysis

Tools for accessing and packaging data from behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.

An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

Arbitrary modality registration to CCFv3 using deep learning

Library of generic Python AWS utils used by the AIBS Informatics "Marmot" team

Repository containing JEM (JSON Electrophysiology Metadata), a web-form for logging metadata during slice electrophysiology experiments.

Code base generating formatted data tables that streamlines data analysis process for ephys production metadata.