python3 serverside build fails

[zimmermant]

When I run docker compose --profile python3 up --build I get the following error: target python3-shell: failed to solve: process "/bin/sh -c pip3 install -r /tmp/requirements.txt --ignore-installed" did not complete successfully: exit code: 1
I get a similar error for Pygame

R install fine and works and Java installs fine.

Docker 4.63 on MacOS 15.7.4

Below is the command line output

Building 75.7s (32/39)
=> [internal] load local bake definitions 0.0s
=> => reading from stdin 1.66kB 0.0s
=> [nginx internal] load build definition from Dockerfile 0.0s
=> => transferring dockerfile: 348B 0.0s
=> [pygame-manager internal] load build definition from Dockerfile 0.0s
=> => transferring dockerfile: 432B 0.0s
=> [pygame-worker internal] load build definition from Dockerfile 0.0s
=> => transferring dockerfile: 2.13kB 0.0s
=> [nginx internal] load metadata for docker.io/library/nginx:alpine 0.4s
=> [pygame-manager internal] load metadata for docker.io/library/node:18-slim 0.4s
=> [pygame-worker internal] load metadata for docker.io/library/ubuntu:22.04 0.6s
=> [nginx internal] load .dockerignore 0.0s
=> => transferring context: 2B 0.0s
=> [nginx 1/4] FROM docker.io/library/nginx:alpine@sha256:f46cb72c7df02710e693e863a983ac42f6a9579058a59a35f1ae36c9958e4ce0 0.0s
=> => resolve docker.io/library/nginx:alpine@sha256:f46cb72c7df02710e693e863a983ac42f6a9579058a59a35f1ae36c9958e4ce0 0.0s
=> [nginx internal] load build context 0.0s
=> => transferring context: 32B 0.0s
=> CACHED [nginx 2/4] RUN rm /etc/nginx/conf.d/default.conf 0.0s
=> CACHED [nginx 3/4] COPY nginx.conf /etc/nginx/nginx.conf 0.0s
=> CACHED [nginx 4/4] RUN mkdir -p /var/www/generated/python /var/www/generated/java /var/www/generated/r 0.0s
=> [nginx] exporting to image 0.1s
=> => exporting layers 0.0s
=> => exporting manifest sha256:489fedc451bdb24ecfdc2be26d854c2f4923f65037018491dc5873c7427a96a6 0.0s
=> => exporting config sha256:7402c1c0702387c232c0f69728fdb56f39c4e758a2b2fe594a422ffd56f7d8bb 0.0s
=> => exporting attestation manifest sha256:40d5f47201741b1aa93b46bc07bac5e264827b71eb71030082845692a457490f 0.0s
=> => exporting manifest list sha256:72e3758f3fa0e458c3948153bb3940694b53df8176cd47b5447347add96c8ee5 0.0s
=> => naming to docker.io/library/serverside-nginx:latest 0.0s
=> => unpacking to docker.io/library/serverside-nginx:latest 0.0s
=> [pygame-manager internal] load .dockerignore 0.0s
=> => transferring context: 2B 0.0s
=> [pygame-manager 1/7] FROM docker.io/library/node:18-slim@sha256:f9ab18e354e6855ae56ef2b290dd225c1e51a564f87584b9bd21dd651838830e 0.0s
=> => resolve docker.io/library/node:18-slim@sha256:f9ab18e354e6855ae56ef2b290dd225c1e51a564f87584b9bd21dd651838830e 0.0s
=> [pygame-manager internal] load build context 0.0s
=> => transferring context: 9.39kB 0.0s
=> CACHED [pygame-manager 2/7] WORKDIR /app 0.0s
=> CACHED [pygame-manager 3/7] COPY package*.json ./ 0.0s
=> CACHED [pygame-manager 4/7] RUN npm install --production 0.0s
=> CACHED [pygame-manager 5/7] COPY manager.js ./ 0.0s
=> CACHED [pygame-manager 6/7] COPY config/ ./config/ 0.0s
=> CACHED [pygame-manager 7/7] RUN mkdir -p /tmp/pygame-generated 0.0s
=> [pygame-manager] exporting to image 0.1s
=> => exporting layers 0.0s
=> => exporting manifest sha256:229f2e984ed101c6b8bb8038e746e15e689d90e652bd18604e638b1b14cfc305 0.0s
=> => exporting config sha256:6d8a91c875cb70b16833e8531bf165d371cc99f86eb5e17ad11e5aad59b834dd 0.0s
=> => exporting attestation manifest sha256:458b7e70e1ccfb5065cb5c35338dd0785ff2c8449d5fd2019fc9cff92dcd9c4c 0.0s
=> => exporting manifest list sha256:c15052b97d35f2d02989c11f58a509600fe9dc8315ac584029cf995cd65482a4 0.0s
=> => naming to docker.io/library/serverside-pygame-manager:latest 0.0s
=> => unpacking to docker.io/library/serverside-pygame-manager:latest 0.0s
=> [nginx] resolving provenance for metadata file 0.0s
=> [pygame-manager] resolving provenance for metadata file 0.0s
=> [pygame-worker internal] load .dockerignore 0.0s
=> => transferring context: 2B 0.0s
=> CACHED [pygame-worker 1/11] FROM docker.io/library/ubuntu:22.04@sha256:ce4a593b4e323dcc3dd728e397e0a866a1bf516a1b7c31d6aa06991baec4f2e0 0.0s
=> => resolve docker.io/library/ubuntu:22.04@sha256:ce4a593b4e323dcc3dd728e397e0a866a1bf516a1b7c31d6aa06991baec4f2e0 0.0s
=> [pygame-worker internal] load build context 0.0s
=> => transferring context: 400B 0.0s
=> [pygame-worker 2/11] RUN apt-get update && apt-get install -y python3 python3-pip python3-dev python3-tk tightvncserver xvfb x11-xserver-utils x11-apps 61.4s
=> [pygame-worker 3/11] COPY requirements.txt /tmp/requirements.txt 0.1s
=> ERROR [pygame-worker 4/11] RUN pip3 install --no-cache-dir -r /tmp/requirements.txt 13.2s

[pygame-worker 4/11] RUN pip3 install --no-cache-dir -r /tmp/requirements.txt:
0.602 Collecting pygame==2.5.2
0.811 Downloading pygame-2.5.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (13.6 MB)
1.400 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 13.6/13.6 MB 26.2 MB/s eta 0:00:00
1.453 Collecting beautifulsoup4==4.11.1
1.474 Downloading beautifulsoup4-4.11.1-py3-none-any.whl (128 kB)
1.478 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 128.2/128.2 KB 54.8 MB/s eta 0:00:00
1.766 Collecting lxml==4.9.1
1.788 Downloading lxml-4.9.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.manylinux_2_24_aarch64.whl (6.6 MB)
1.869 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 6.6/6.6 MB 84.1 MB/s eta 0:00:00
2.115 Collecting numpy==1.23.2
2.139 Downloading numpy-1.23.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (13.9 MB)
2.296 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 13.9/13.9 MB 84.2 MB/s eta 0:00:00
2.475 Collecting scipy==1.9.0
2.495 Downloading scipy-1.9.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (40.1 MB)
2.934 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 40.1/40.1 MB 87.9 MB/s eta 0:00:00
3.175 Collecting matplotlib==3.5.3
3.198 Downloading matplotlib-3.5.3-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (11.7 MB)
3.337 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 11.7/11.7 MB 83.4 MB/s eta 0:00:00
3.405 Collecting pycolors==0.1.2
3.430 Downloading pycolors-0.1.2.tar.gz (7.3 kB)
3.434 Preparing metadata (setup.py): started
3.524 Preparing metadata (setup.py): finished with status 'done'
3.670 Collecting pandas==1.4.3
3.691 Downloading pandas-1.4.3-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (10.9 MB)
3.793 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.9/10.9 MB 111.4 MB/s eta 0:00:00
3.865 Collecting pygal==3.0.0
3.885 Downloading pygal-3.0.0-py2.py3-none-any.whl (129 kB)
3.890 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 129.4/129.4 KB 45.6 MB/s eta 0:00:00
3.944 Collecting pygal_maps_world==1.0.2
3.967 Downloading pygal_maps_world-1.0.2.tar.gz (270 kB)
3.974 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 270.8/270.8 KB 63.2 MB/s eta 0:00:00
3.990 Preparing metadata (setup.py): started
4.079 Preparing metadata (setup.py): finished with status 'done'
4.203 Collecting pygal_maps_fr==1.1.0
4.224 Downloading pygal_maps_fr-1.1.0-py3-none-any.whl (412 kB)
4.232 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 412.6/412.6 KB 94.5 MB/s eta 0:00:00
4.291 Collecting pygal_maps_ch==1.0.1
4.312 Downloading pygal_maps_ch-1.0.1.tar.gz (57 kB)
4.315 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 57.7/57.7 KB 228.7 MB/s eta 0:00:00
4.321 Preparing metadata (setup.py): started
4.407 Preparing metadata (setup.py): finished with status 'done'
4.469 Collecting cairosvg==2.5.2
4.492 Downloading CairoSVG-2.5.2-py3-none-any.whl (45 kB)
4.496 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 45.8/45.8 KB 38.2 MB/s eta 0:00:00
4.553 Collecting tinycss==0.4
4.578 Downloading tinycss-0.4.tar.gz (87 kB)
4.583 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 87.8/87.8 KB 30.3 MB/s eta 0:00:00
4.595 Preparing metadata (setup.py): started
4.686 Preparing metadata (setup.py): finished with status 'done'
4.739 Collecting cssselect==1.1.0
4.762 Downloading cssselect-1.1.0-py2.py3-none-any.whl (16 kB)
4.857 Collecting bokeh==2.4.3
4.882 Downloading bokeh-2.4.3-py3-none-any.whl (18.5 MB)
5.091 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 18.5/18.5 MB 85.2 MB/s eta 0:00:00
5.258 Collecting scikit-learn==1.1.2
5.282 Downloading scikit_learn-1.1.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (30.1 MB)
5.609 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 30.1/30.1 MB 90.7 MB/s eta 0:00:00
5.697 Collecting patsy==0.5.2
5.718 Downloading patsy-0.5.2-py2.py3-none-any.whl (233 kB)
5.722 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 233.7/233.7 KB 82.4 MB/s eta 0:00:00
5.831 Collecting statsmodels==0.13.2
5.854 Downloading statsmodels-0.13.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (9.6 MB)
5.989 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 9.6/9.6 MB 72.6 MB/s eta 0:00:00
6.034 Collecting requests-oauthlib==1.3.0
6.060 Downloading requests_oauthlib-1.3.0-py2.py3-none-any.whl (23 kB)
6.118 Collecting pronouncing==0.2.0
6.141 Downloading pronouncing-0.2.0.tar.gz (17 kB)
6.148 Preparing metadata (setup.py): started
6.233 Preparing metadata (setup.py): finished with status 'done'
6.284 Collecting names==0.3.0
6.307 Downloading names-0.3.0.tar.gz (789 kB)
6.321 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 789.1/789.1 KB 68.6 MB/s eta 0:00:00
6.350 Preparing metadata (setup.py): started
6.421 Preparing metadata (setup.py): finished with status 'done'
6.477 Collecting pycep-correios==5.0.0
6.501 Downloading pycep_correios-5.0.0-py2.py3-none-any.whl (7.1 kB)
6.564 Collecting seaborn==0.11.2
6.586 Downloading seaborn-0.11.2-py3-none-any.whl (292 kB)
6.593 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 292.8/292.8 KB 71.9 MB/s eta 0:00:00
6.654 Collecting exifread==3.0.0
6.675 Downloading ExifRead-3.0.0-py3-none-any.whl (40 kB)
6.679 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 40.4/40.4 KB 181.5 MB/s eta 0:00:00
6.777 Collecting biopython==1.79
6.800 Downloading biopython-1.79.tar.gz (16.7 MB)
6.978 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.7/16.7 MB 95.4 MB/s eta 0:00:00
7.572 Preparing metadata (setup.py): started
7.678 Preparing metadata (setup.py): finished with status 'done'
7.737 Collecting ete3==3.1.2
7.759 Downloading ete3-3.1.2.tar.gz (4.7 MB)
7.818 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.7/4.7 MB 84.5 MB/s eta 0:00:00
7.955 Preparing metadata (setup.py): started
8.075 Preparing metadata (setup.py): finished with status 'done'
8.179 Collecting mysql-connector-python==8.0.26
8.202 Downloading mysql_connector_python-8.0.26-py2.py3-none-any.whl (324 kB)
8.209 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 324.8/324.8 KB 79.5 MB/s eta 0:00:00
8.275 Collecting sympy==1.10.1
8.301 Downloading sympy-1.10.1-py3-none-any.whl (6.4 MB)
8.360 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 6.4/6.4 MB 110.6 MB/s eta 0:00:00
8.465 Collecting pytest==7.1.2
8.491 Downloading pytest-7.1.2-py3-none-any.whl (297 kB)
8.495 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 297.0/297.0 KB 105.0 MB/s eta 0:00:00
8.568 Collecting networkx==2.6.3
8.590 Downloading networkx-2.6.3-py3-none-any.whl (1.9 MB)
8.611 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.9/1.9 MB 103.7 MB/s eta 0:00:00
8.938 Collecting Cython==0.29.32
8.959 Downloading Cython-0.29.32-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.manylinux_2_24_aarch64.whl (1.8 MB)
8.978 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.8/1.8 MB 104.3 MB/s eta 0:00:00
9.070 Collecting basemap==1.3.6
9.089 Downloading basemap-1.3.6.zip (156 kB)
9.094 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 156.4/156.4 KB 51.0 MB/s eta 0:00:00
9.169 Installing build dependencies: started
12.91 Installing build dependencies: finished with status 'done'
12.91 Getting requirements to build wheel: started
13.01 Getting requirements to build wheel: finished with status 'done'
13.01 ERROR: Some build dependencies for basemap==1.3.6 from https://files.pythonhosted.org/packages/9d/7f/52d4e666c21e8a07671e343f7ce7fb15d082ada4557e5c6bd41b05c6394e/basemap-1.3.6.zip#sha256=3789fd5092ff90610f9712d431f186c0c0f7feb51dcaac7b60191b818ee77b44 (from -r /tmp/requirements.txt (line 39)) conflict with the backend dependencies: cython==3.0.12 is incompatible with cython<3.0,>=0.29; python_version == "2.6", cython==3.0.12 is incompatible with cython<3.0,>=0.29; python_version == "2.7", cython==3.0.12 is incompatible with cython<3.0,>=0.29; python_version == "3.3", cython==3.0.12 is incompatible with cython<3.0,>=0.29; python_version == "3.4".

[+] up 0/3
⠙ Image serverside-pygame-manager Building 75.8s
⠙ Image serverside-pygame-worker Building 75.8s
⠙ Image serverside-nginx Building 75.8s
Dockerfile:46

---

44 | # Install Python packages

45 | COPY requirements.txt /tmp/requirements.txt

46 | >>> RUN pip3 install --no-cache-dir -r /tmp/requirements.txt

47 |

48 | # Create non-root user for running code

---

target pygame-worker: failed to solve: process "/bin/sh -c pip3 install --no-cache-dir -r /tmp/requirements.txt" did not complete successfully: exit code: 1

[brianpmarks]

@zimmermant Thanks for the report. Do you know if you need basemap? If not you might try removing that from the requirements.txt file and rebuilding. I can also upgrade it and add any missing dependencies if it is useful for your use case.

[zimmermant]

Commenting that line out fixed the issue. Same for pygame.