Commit 04b364d
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Bring up to version sgn-449.0. Includes support for intercropping; use of obsoleted stocks in trials; fixes to the trait search so that treatments will not be shown; a cosmetic tweak to the cvterm detail page; adds a sliding trial title such that it is always visible; fixes a bug in the job submission system that required parameters that were not necessary.
1 parent 4363228 commit 04b364d
1 file changed
Lines changed: 1 addition & 1 deletion
- db/00203/AddIntercropPlotOfCvterm.pm+73
- db/00203/UpdateMaterializedPhenoviewIntercrop.pm+1.6k
- db/00203/UpdatePhenotypeJsonbTableMaterializedViewIntercrop.pm+215
- db/00204/AddAccessionsAndObsoletedAccessionsListTypesCvterm.pm+73
- js/source/entries/fieldmap.js+12-4
- js/source/legacy/solGS/analysisSelect.js+1-1
- js/source/legacy/solGS/correlation.js+4-4
- js/source/legacy/solGS/heatMap.js+15-16
- js/source/legacy/solGS/kinship.js+3-3
- js/source/legacy/solGS/selectionIndex.js+3-1
- js/source/modules/wizard-downloads.js+2
- lib/CXGN/BrAPI/v2/Common.pm+1-1
- lib/CXGN/BrAPI/v2/ObservationUnits.pm+9
- lib/CXGN/BrAPI/v2/ObservationVariables.pm+7-1
- lib/CXGN/File/Parse/Plugin/Plain.pm+1-1
- lib/CXGN/File/Parse/Plugin/Spreadsheet.pm+1-1
- lib/CXGN/Job.pm+8-8
- lib/CXGN/List/Validate/Plugin/Accessions.pm+3-3
- lib/CXGN/List/Validate/Plugin/AccessionsAndObsoletedAccessions.pm+2-2
- lib/CXGN/List/Validate/Plugin/NewStocks.pm+45
- lib/CXGN/Phenotypes/PhenotypeMatrix.pm+100-1
- lib/CXGN/Phenotypes/Search/MaterializedViewTable.pm+5-3
- lib/CXGN/Phenotypes/Search/Native.pm+27-11
- lib/CXGN/Project.pm+11-7
- lib/CXGN/Stock.pm+13-13
- lib/CXGN/Stock/ParseUpload/Plugin/TransgenicHistoricalDataGeneric.pm+1-1
- lib/CXGN/Stock/StockLookup.pm+30-11
- lib/CXGN/Trait/Search.pm+29-2
- lib/CXGN/Trial/Download.pm+2
- lib/CXGN/Trial/Download/Plugin/TrialPhenotypeCSV.pm+4
- lib/CXGN/Trial/Download/Plugin/TrialPhenotypeCSVEntryNumbers.pm-218
- lib/CXGN/Trial/Download/Plugin/TrialPhenotypeExcel.pm+5-1
- lib/CXGN/Trial/Download/Plugin/TrialPhenotypeExcelEntryNumbers.pm-215
- lib/CXGN/Trial/FieldMap.pm+97-77
- lib/CXGN/Trial/ParseUpload/Plugin/MultipleTrialDesignGeneric.pm+25-6
- lib/CXGN/Trial/ParseUpload/Plugin/TrialChangePlotAccessions.pm+127
- lib/CXGN/Trial/ParseUpload/Plugin/TrialChangePlotAccessionsCSV.pm-246
- lib/CXGN/Trial/ParseUpload/Plugin/TrialGeneric.pm+25-5
- lib/CXGN/Trial/TrialCreate.pm+2
- lib/CXGN/Trial/TrialDesignStore/AbstractTrial.pm+23-3
- lib/CXGN/Trial/TrialDesignStore/PhenotypingTrial.pm+21-4
- lib/CXGN/Trial/TrialLayoutSearch.pm+22-8
- lib/SGN/Controller/AJAX/HTMLSelect.pm+61-25
- lib/SGN/Controller/AJAX/Search/Stock.pm+3-1
- lib/SGN/Controller/AJAX/Search/Trait.pm+43-3
- lib/SGN/Controller/AJAX/Search/Treatment.pm+23-3
- lib/SGN/Controller/AJAX/Trial.pm+10-2
- lib/SGN/Controller/AJAX/TrialMetadata.pm+102-39
- lib/SGN/Controller/BreedersToolbox/Download.pm+9-9
- lib/SGN/Controller/BreedersToolbox/Trial.pm+6-6
- lib/SGN/Controller/Stock.pm+1-1
- lib/SGN/Controller/solGS/Correlation.pm+4-4
- mason/breeders_toolbox/breeder_search_page.mas+28-21
- mason/breeders_toolbox/download.mas+12
- mason/breeders_toolbox/trial.mas+13-1
- mason/breeders_toolbox/trial/change_plot_accessions_dialogs.mas+6-3
- mason/breeders_toolbox/trial/download_phenotypes_dialog.mas+40-29
- mason/breeders_toolbox/trial/download_trials_phenotypes_dialog.mas+30-30
- mason/breeders_toolbox/trial/phenotype_heatmap.mas+12-5
- mason/breeders_toolbox/trial/trial_plants.mas+3-1
- mason/breeders_toolbox/trial/trial_stocks.mas+18-1
- mason/breeders_toolbox/trial/trial_subplots.mas+2-1
- mason/breeders_toolbox/trial/trial_upload_dialogs.mas+2
- mason/chado/cvterm.mas+21-23
- mason/search/stocks.mas+15-1
- mason/search/traits.mas+14
- mason/search/treatments.mas+14
- sgn.conf+5-3
- static/css/new_sgn.css+548-452
- t/selenium2/breeders/upload_multi_trial_file.t+22-2
- t/unit_fixture/CXGN/Uploading/TrialUpload.t+34-2
- t/unit_mech/AJAX/BreedersToolbox/TrialMetadata.t+1-1
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