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updated file max file size for bedbase
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-2
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geopephub/const.py

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@@ -22,3 +22,5 @@
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# db_dialects
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POSTGRES_DIALECT = "postgresql+psycopg"
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BEDBASE_MAX_SIZE = "500MB"

geopephub/metageo_pephub.py

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@@ -11,7 +11,7 @@
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import peppy
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from geopephub.const import LAST_UPDATE_DATES
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from geopephub.const import LAST_UPDATE_DATES, BEDBASE_MAX_SIZE
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from geopephub.utils import get_agent, get_base_db_engine
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from geopephub.models import StatusModel, CycleModel
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from geopephub.utils import run_geofetch, add_link_to_description
@@ -191,7 +191,7 @@ def _upload_gse_project(
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if target == "bedbase":
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geofetcher_obj = geofetch.Geofetcher(
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filter="\.(bed|bigBed|narrowPeak|broadPeak)\.",
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filter_size="25MB",
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filter_size=BEDBASE_MAX_SIZE,
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data_source="samples",
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processed=True,
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)

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