embedding-kit/pyproject.toml at develop · ohsu-comp-bio/embedding-kit · GitHub

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[build-system]
requires = ["setuptools>=61.0"]
build-backend = "setuptools.build_meta"

[project]
name = "embkit"
version = "0.3"
description = "Embedding Kit for embedding models"
readme = "README.md"
requires-python = ">=3.8"
license = { text = "MIT" }
authors = [
    { name = "Kyle Ellrott", email = "[email protected]" },
    { name = "Raphael Kirchgaessner", email = "[email protected]" }
]
keywords = ["embeddings", "machine learning", "deep learning"]
dependencies = [
    "torch>=2.0",
    "pandas",
    "numpy",
    "click",
    "scikit-learn",
    "scipy",
    "gripql",
    "tqdm",
    "biopython",
    "fair-esm",
    "faiss-cpu",
    "h5py"
]

[tool.setuptools]
package-dir = { "" = "src" }

[tool.setuptools.packages.find]
where = ["src"]

[project.scripts]
embkit = "embkit.__main__:cli"