Currently, we use a single config yaml file called config.yml.
We should consider splitting this file into three different config yaml files
| File |
Contents |
Notes |
pipeline.yml |
Modular block design of pipeline steps |
Depends on cytomining/profiling-recipe#11 and cytomining/profiling-recipe#12 |
experiment.yml |
batch and plate info, decision on whether or not to process |
This is the primary reason for the config split. For large experiments, the plate and batch specifications can get huge! |
advanced.yml |
Anything outside of the block design and plate info |
e.g. #8 |
Currently, we use a single config yaml file called
config.yml.We should consider splitting this file into three different config yaml files
pipeline.ymlexperiment.ymladvanced.yml