Fix chained method calls and add integration test with cosmicqc (#99)

* add cosmicqc and integration test

* linting

* make changes to ensure project integration

* add fetch-depth 0 for version tags

* Update run-tests.yml

* set git config

* fetch depth

* bump to large version

* readd git user

* Update run-tests.yml

* simulate version through poetry instead

* revert to 0.0.0 in pyproject

* reorder simulation of version

* [pre-commit.ci lite] apply automatic fixes

* correct pyproject and prevent pre-commit-lite

* catch other tests; update pre-commit

* remove dev from publish

---------

Co-authored-by: pre-commit-ci-lite[bot] <117423508+pre-commit-ci-lite[bot]@users.noreply.github.com>

Author: d33bs

.github/workflows/publish-docs.yml

@@ -23,6 +23,9 @@ jobs:
       - uses: actions/setup-python@v5
         with:
           python-version: "3.11"
+      - name: Simulate version tag for cosmicqc install compatibility
+        run: |
+          poetry version 99.0.0
       - name: Setup for poetry
         run: |
           python -m pip install poetry poetry-dynamic-versioning

.github/workflows/publish-pypi.yml

@@ -27,7 +27,7 @@ jobs:
         run: |
           python -m pip install poetry poetry-dynamic-versioning
       - name: Install environment
-        run: poetry install --no-interaction --no-ansi
+        run: poetry install --without dev --no-interaction --no-ansi
       - name: poetry build distribution content
         run: poetry build
       - name: Publish package distributions to PyPI

.github/workflows/run-tests.yml

@@ -21,13 +21,17 @@ jobs:
       - name: Setup for poetry
         run: |
           python -m pip install poetry
+      - name: Simulate version tag for cosmicqc install compatibility
+        run: |
+          poetry version 99.0.0
       - name: Install environment
         run: poetry install --no-interaction --no-ansi
       # run pre-commit
       - uses: pre-commit/action@v3.0.1
+        id: pre_commit
       # run pre-commit ci lite for automated fixes
       - uses: pre-commit-ci/lite-action@v1.1.0
-        if: ${{ !cancelled() }}
+        if: ${{ !cancelled() && steps.pre_commit.outcome == 'failure' }}
   run_tests:
     strategy:
       matrix:
@@ -46,6 +50,9 @@ jobs:
       - name: Setup for poetry
         run: |
           python -m pip install poetry
+      - name: Simulate version tag for cosmicqc install compatibility
+        run: |
+          poetry version 99.0.0
       - name: Install environment
         run: poetry install --no-interaction --no-ansi
       - name: Run pytest

.pre-commit-config.yaml

@@ -16,7 +16,7 @@ repos:
     -   id: check-added-large-files
     -   id: detect-private-key
 -   repo: https://github.com/python-poetry/poetry
-    rev: "2.1.2"
+    rev: "2.1.3"
     hooks:
     -   id: poetry-check
 -   repo: https://github.com/tox-dev/pyproject-fmt
@@ -45,7 +45,7 @@ repos:
     hooks:
     -   id: validate-cff
 -   repo: https://github.com/adrienverge/yamllint
-    rev: v1.37.0
+    rev: v1.37.1
     hooks:
     -   id: yamllint
         exclude: pre-commit-config.yaml
@@ -54,7 +54,7 @@ repos:
     hooks:
     -   id: actionlint
 -   repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: "v0.11.7"
+    rev: "v0.11.9"
     hooks:
     -   id: ruff-format
     -   id: ruff