- RP2paths.py: trigger version update
- Scope.py: maxIter default value
- RP2Paths.py: maxIter-1
- rp2erxn.py: skips without failure transformation having dot-containing products (#8)
- add --no-color global option
- RP2Paths.py: remove cofactors from compound and reaction files
- add --forward mode, to be used with empty sink
-
tests/module.py: fix file path
-
RP2Paths.py: rm params
-
environment: add max version for rdkit
-
replace '--reverse' (default: True) into '--forward' (default: False)
- tests: add abs path
- RP2paths.py: add # nosec for subprocess calls
- tests: abs path for outdir
- RP2paths.py: check setsid for Windows
- setup: include submodules and needed data
- setup.py: remove test_require var
- on purpose increasing version number to please PyPI
- set maxstep default value to +inf
- version: read version from RELEASE.md
- Scope: keep writing empty file for discarded reactions
- pyEMSv2: commenting out bugged but unused code
- use "rp2paths" instead of "src"