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This repository was archived by the owner on Sep 12, 2024. It is now read-only.

Notes from course 2023-12-06 #13

Description

@adamltyson

Good

  • Materials nice
  • Documentation good, helpful reference for future (x2)
  • Good overview
  • Good demos in napari

Could be improved

  • Should install everything (inc fetching atlases, data etc.) at the beginning
  • Give time to play around with data (should we create problems to solve)
  • Maybe do theory/practical/theory/practical?
  • Can we find one "superdataset" with all types of feature (cells, probes, lesions etc) in it?
  • Show applications in published papers
  • Move initial checkup (who knows what) earlier
  • Introduce dask & loading virtual stacks before loading serial2p data
  • Remove use of paths in napari console, focus on inspecting the napari layer object programatically
  • Slide at end to ask for return of HDDs
  • Intro slide to introduce NIU and BG core devs?
  • Highlight that the check orientation plugin isn't appropriate for large datasets
  • Instantiating viewer variable in demo script closer to where it's used.
  • have HDs for at least half the participants

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