iTALK/DESCRIPTION at main · WaveoffBioMed/iTALK · GitHub

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Package: iTALK
Type: Package
Title: Characterize and Illustrate Intercellular Communication
Version: 0.1.1
Date: 2026-01-23
Author: Zaoqu Liu [aut, cre], Yuanxin Wang [aut]
Maintainer: Zaoqu Liu <liuzaoqu@163.com>
URL: https://github.com/Zaoqu-Liu/iTALK
BugReports: https://github.com/Zaoqu-Liu/iTALK/issues
Description: iTALK, a computational approach to characterize, compare,
    and illustrate intercellular communication signals in the multicellular
    ecosystem using either bulk RNA sequencing data or single cell RNAseq data.
    iTALK can in principle be used to dissect the complexity, diversity, and
    dynamics of cell-cell communication from a wide range of cellular processes.
License: file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.5.0)
Imports:
    methods,
    progress,
    pbapply,
    dplyr,
    tidyr,
    tibble,
    graphics,
    randomcoloR,
    circlize,
    ggplot2,
    igraph,
    biomaRt,
    httr,
    R.cache,
    digest
Suggests:
    BiocParallel,
    Biobase,
    DESeq2,
    edgeR,
    monocle,
    scde,
    DEsingle,
    MAST,
    knitr,
    rmarkdown,
    testthat (>= 3.0.0),
    RColorBrewer,
    viridis
VignetteBuilder: knitr
biocViews: RNASequencing, SingleCell, GeneExpression, CellBiology
RoxygenNote: 7.3.3
Config/testthat/edition: 3