Merge pull request #3 from TRON-Bioinformatics/docker-build

Docker build

Author: ibn-salem

.github/workflows/docker-build.yml

@@ -0,0 +1,39 @@
+name: Build and Push Docker Image
+
+on:
+  release:
+    types:
+      - published
+
+jobs:
+  build-and-push:
+    runs-on: ubuntu-24.04
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Log in to GitHub Container Registry
+        uses: docker/login-action@v3
+        with:
+          registry: ghcr.io
+          username: ${{ github.actor }}
+          password: ${{ secrets.GITHUB_TOKEN }}
+          
+      - name: Derive lowercase repo slug
+        run: echo "GITHUB_REPOSITORY_OWNER_LOWERCASE=${GITHUB_REPOSITORY_OWNER,,}" >> $GITHUB_ENV
+
+      - name: Get latest release version
+        id: get_latest_release
+        run: |
+          latest_release=$(curl -s https://api.github.com/repos/${{ github.repository }}/releases/latest | jq -r .tag_name)
+          echo "LATEST_RELEASE=$latest_release" >> $GITHUB_ENV
+
+      - name: Build and push Docker image
+        uses: docker/build-push-action@v5
+        with:
+          file: ./Docker/Dockerfile
+          push: true
+          tags: ghcr.io/${{ env.GITHUB_REPOSITORY_OWNER_LOWERCASE }}/splice2neo:${{ env.LATEST_RELEASE }}

Docker/Dockerfile

@@ -1,4 +1,4 @@
-FROM docker://rocker/r-ver:4.2.3
+FROM rocker/r-ver:4.2.3
 
 ENV SRC /usr/local/src
 ENV BIN /usr/local/bin