Merge pull request #461 from ModECI/development

Updates to NeuroML examples; regenerated images; to v0.4.6

Author: pgleeson

.github/workflows/ci.yml

@@ -59,12 +59,19 @@ jobs:
         python -m pytest -m coremdf tests/
 
     - name: Install optional dependencies
-      run: python -m pip install .[all]
+      run: |
+        python -m pip install .[all]
 
     - name: Version info for optional installed packages
       run: |
           pip list
 
+    - name: Install graphviz
+      if: ${{ matrix.runs-on != 'windows-latest' }}
+      run: |
+        if [[  ${{ matrix.runs-on }} == *"macos"* ]]; then brew install graphviz ; fi
+        if [[  ${{ matrix.runs-on }} == *"ubuntu"* ]]; then sudo apt install graphviz ; fi
+
     - name: Test interface ACT-R
       if: ${{ matrix.python-version != '3.10' || matrix.runs-on != 'windows-latest' }}
       run: |
@@ -88,8 +95,6 @@ jobs:
     - name: Test interface TensorFlow linux/mac
       if: ${{ matrix.runs-on != 'windows-latest' }}
       run: |
-        if [[  ${{ matrix.runs-on }} == *"macos"* ]]; then brew install graphviz ; fi
-        if [[  ${{ matrix.runs-on }} == *"ubuntu"* ]]; then sudo apt install graphviz ; fi
         dot -V
         python -m pytest -v -m "tensorflow" tests/
 

.gitignore

@@ -276,3 +276,5 @@ Thumbs.db #thumbnail cache on Windows
 /examples/MDF/NLP/TestNLP
 /examples/MDF/conditions/composite_example
 /examples/NeuroML/arm64
+/examples/MDF/RNN/iaf.net
+/examples/MDF/RNN/iaf.net2