This line should just be else:

[dkoslicki]

dnds-using-fmh/src/sourmash_dnds_estimation/dNdS/create_ground_truth_file.py

Line 109 in cd73637

elif p >= 1-p_mutation_rate:

Otherwise, you're mutating p % of the time, and not mutating p% of the time as well (and we want not mutating 1-p% of the time)