setup.py

#!/usr/bin/env python
from setuptools import setup, find_packages
from glob import glob
import os.path

# Set __version__
exec(open('snakePipes/__init__.py').read())

scripts = ['bin/snakePipes']
for d in glob('snakePipes/workflows/*'):
    scripts.append(os.path.join(d, os.path.split(d)[1]))

requires = open("requirements.txt").read().strip().split("\n")

setup(
    name='snakePipes',
    version=__version__,  # noqa: F821
    scripts=scripts,
    packages=find_packages(),
    include_package_data=True,
    python_requires='>=3.7',
    install_requires=requires,
    url='https://github.com/maxplanck-ie/snakepipes',
    license='MIT',
    description='Snakemake workflows and wrappers for NGS data processing from the MPI-IE',
    zip_safe=False,
    data_files=[("", ["LICENSE"])]
)