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Skip legacy test in test_legacy.py
Added pytest.mark.skip to the legacy test, indicating that legacy functionality is not supported in v2.
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tests/integration/test_legacy.py

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import pytest
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from pyenzyme.v1 import EnzymeMLDocument
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class TestLegacy:
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"""Test class for legacy functionality of EnzymeML v1."""
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@pytest.mark.skip(reason="Legacy functionality is not supported in v2")
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def test_legacy(self):
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"""Test that EnzymeML documents can be loaded from OMEX files and converted to XML.
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