Installation failure in MacOS #80
Description
Hi, I am trying to install bamliquidator in my MacOS Mojave 10.14.6, but encountered the following:
(base) breastadms-MBP:bamliquidator_internal xiaoyongfu$ brew install jdimatteo/science/[email protected]
==> Tapping jdimatteo/science
Cloning into '/usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science'...
remote: Enumerating objects: 35046, done.
remote: Total 35046 (delta 0), reused 0 (delta 0), pack-reused 35046
Receiving objects: 100% (35046/35046), 9.24 MiB | 11.81 MiB/s, done.
Resolving deltas: 100% (22278/22278), done.
Warning: Calling depends_on :java is deprecated! Use "depends_on "openjdk@11", "depends_on "openjdk@8" or "depends_on "openjdk" instead.
Please report this issue to the jdimatteo/science tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/des.rb:15
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/oce.rb
unknown or unsupported macOS version: :snow_leopard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/beetl.rb
beetl: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/fastml.rb
unknown or unsupported macOS version: :mavericks
Warning: Calling depends_on :java is deprecated! Use "depends_on "openjdk@11", "depends_on "openjdk@8" or "depends_on "openjdk" instead.
Please report this issue to the jdimatteo/science tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/trinity.rb:27
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/libfolia.rb
libfolia: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/siril.rb
siril: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/ome-xml.rb
ome-xml: uninitialized constant #Class:0x00007feda900c7a8::MinimumMacOSRequirement
Warning: Calling depends_on :java is deprecated! Use "depends_on "openjdk@11", "depends_on "openjdk@8" or "depends_on "openjdk" instead.
Please report this issue to the jdimatteo/science tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/astral.rb:14
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/stacks.rb
stacks: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/ds9.rb
unknown or unsupported macOS version: :lion
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/dynare.rb
dynare: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/scram.rb
scram: "cxx14" is not a recognized standard
Warning: Calling depends_on :java is deprecated! Use "depends_on "openjdk@11", "depends_on "openjdk@8" or "depends_on "openjdk" instead.
Please report this issue to the jdimatteo/science tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/bbtools.rb:16
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/nexusformat.rb
nexusformat: Calling BuildOptions#cxx11? is disabled! There is no replacement.
Please report this issue to the jdimatteo/science tap (not Homebrew/brew or Homebrew/core):
/usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/nexusformat.rb:22
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/itensor.rb
itensor: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/timbl.rb
timbl: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/wopr.rb
wopr: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/nixio.rb
nixio: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/trilinos.rb
trilinos: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/geda-gaf.rb
geda-gaf: undefined method `devel' for #Class:0x00007fedd98cdd08
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/adol-c.rb
adol-c: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/discovardenovo.rb
discovardenovo: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/bitseq.rb
bitseq: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/galfit.rb
unknown or unsupported macOS version: :leopard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/ome-files.rb
ome-files: uninitialized constant #Class:0x00007feda915a088::MinimumMacOSRequirement
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/alembic.rb
alembic: "cxx11" is not a recognized standard
Warning: Calling depends_on :java is deprecated! Use "depends_on "openjdk@11", "depends_on "openjdk@8" or "depends_on "openjdk" instead.
Please report this issue to the jdimatteo/science tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/paxtools.rb:7
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/ticcutils.rb
ticcutils: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/rna-star.rb
rna-star: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/elemental.rb
elemental: undefined method devel' for #<Class:0x00007fedd98dc790> Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/opengrm-ngram.rb opengrm-ngram: "cxx11" is not a recognized standard Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/osgearth.rb osgearth: uninitialized constant #<Class:0x00007feda90d14b8>::MinimumMacOSRequirement Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/sailfish.rb sailfish: "cxx11" is not a recognized standard Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/discovar.rb discovar: "cxx11" is not a recognized standard Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/flexbar.rb flexbar: "cxx14" is not a recognized standard Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/ome-common.rb ome-common: uninitialized constant #<Class:0x00007feda932af20>::MinimumMacOSRequirement Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/openni.rb openni: undefined method devel' for #Class:0x00007feda93b3c08
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/radx.rb
radx: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/dealii.rb
dealii: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/vigra.rb
vigra: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/quaff.rb
quaff: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/insighttoolkit.rb
insighttoolkit: Calling BuildOptions#cxx11? is disabled! There is no replacement.
Please report this issue to the jdimatteo/science tap (not Homebrew/brew or Homebrew/core):
/usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/insighttoolkit.rb:22
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/mlpack.rb
mlpack: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/opengrm-thrax.rb
opengrm-thrax: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/symengine.rb
symengine: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/analysis.rb
analysis: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/mantaflow.rb
mantaflow: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/butterflow.rb
unknown or unsupported macOS version: :mavericks
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/dgtal.rb
dgtal: "cxx11" is not a recognized standard
Warning: Calling depends_on :java is deprecated! Use "depends_on "openjdk@11", "depends_on "openjdk@8" or "depends_on "openjdk" instead.
Please report this issue to the jdimatteo/science tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/cytoscape.rb:17
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/fplll.rb
fplll: "cxx11" is not a recognized standard
Warning: Calling depends_on :java is deprecated! Use "depends_on "openjdk@11", "depends_on "openjdk@8" or "depends_on "openjdk" instead.
Please report this issue to the jdimatteo/science tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/simpleitk.rb:33
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/tamarin-prover.rb
unknown or unsupported macOS version: :mountain_lion
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/lsd.rb
lsd: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/arrayfire.rb
unknown or unsupported macOS version: :mavericks
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/sdsl-lite.rb
sdsl-lite: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/spaced.rb
spaced: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/openfst.rb
openfst: "cxx11" is not a recognized standard
Error: Invalid formula: /usr/local/Homebrew/Library/Taps/jdimatteo/homebrew-science/Formula/dssp.rb
dssp: "cxx11" is not a recognized standard
Error: Cannot tap jdimatteo/science: invalid syntax in tap!
Thanks for help!
Xiaoyong