Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Type
/
to search
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
AllenCell
/
EMT_data_analysis
Public
Notifications
You must be signed in to change notification settings
Fork
0
Star
1
Code
Issues
6
Pull requests
0
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Projects
Security and quality
Insights
Actions: AllenCell/EMT_data_analysis
Actions
All workflows
Workflows
CI
CI
Copilot code review
Copilot code review
Show more workflows...
Management
Caches
All workflows
All workflows
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Showing runs from all workflows
will be ignored since log searching is not yet available
56 workflow runs
56 workflow runs
Workflow
Filter by Workflow
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching workflows.
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
Update requirements.txt with joblib dependency
CI
#31:
Commit
b5fe693
pushed by
smishra3
26s
fix/reSub-v2
fix/reSub-v2
26s
View workflow file
Update pdm.lock with joblib dependency
CI
#30:
Commit
563e90d
pushed by
smishra3
25s
fix/reSub-v2
fix/reSub-v2
25s
View workflow file
Update inside-outside_classification.py with more timepoints and legend
CI
#29:
Commit
5f3ec9e
pushed by
smishra3
24s
fix/reSub-v2
fix/reSub-v2
24s
View workflow file
Fix floating point precision issue in plot_tools timepoint matching
CI
#28:
Commit
e1d221c
pushed by
smishra3
25s
fix/reSub-v2
fix/reSub-v2
25s
View workflow file
Fix NaN handling in correlation and update Analysis_tools.py
CI
#27:
Commit
cb8969a
pushed by
smishra3
24s
fix/reSub-v2
fix/reSub-v2
24s
View workflow file
Replace Nuclei_localization with flat-cap mesh closing (no watertight)
CI
#26:
Commit
8054b98
pushed by
smishra3
24s
fix/reSub-v2
fix/reSub-v2
24s
View workflow file
Rewrite Metric_computation.py with bug fixes, optimizations, and new …
CI
#25:
Commit
654a060
pushed by
smishra3
25s
fix/reSub-v2
fix/reSub-v2
25s
View workflow file
Add parallel feature extraction with retry logic and local data loading
CI
#24:
Commit
f527a17
pushed by
smishra3
24s
fix/reSub-v2
fix/reSub-v2
24s
View workflow file
Adding 95% CI for other correlation tests
CI
#23:
Commit
148c486
pushed by
vianamp
22s
feature/bootstrap
feature/bootstrap
22s
View #42
View workflow file
Add random seed for reproducibility
CI
#22:
Commit
3f1ce3a
pushed by
vianamp
25s
feature/bootstrap
feature/bootstrap
25s
View workflow file
pymeshfix implementation of nuclei localization
CI
#21:
Commit
f53636a
pushed by
smishra3
24s
fix/reSub-v2
fix/reSub-v2
24s
View workflow file
new improved localization script
CI
#20:
Commit
edf6bbd
pushed by
smishra3
27s
fix/reSub-v2
fix/reSub-v2
27s
View workflow file
running localization only on selected data ids
CI
#19:
Commit
223724d
pushed by
smishra3
29s
fix/reSub-v2
fix/reSub-v2
29s
View workflow file
removed the artificial 90% threshold
CI
#18:
Commit
4734cf3
pushed by
smishra3
26s
fix/reSub-v2
fix/reSub-v2
26s
View workflow file
added batch2-v2 local segmentation loading
CI
#17:
Commit
7248ad5
pushed by
smishra3
30s
fix/reSub-v2
fix/reSub-v2
30s
View workflow file
removed debug condition for production
CI
#16:
Commit
feef659
pushed by
smishra3
27s
fix/reSub-v2
fix/reSub-v2
27s
View workflow file
added support for local reading of missing mesh files
CI
#15:
Commit
0bbf48a
pushed by
smishra3
25s
fix/reSub-v2
fix/reSub-v2
25s
View workflow file
added support for local(batch1 and missing H2B) and quilt(batch2 and …
CI
#14:
Commit
057e17c
pushed by
smishra3
26s
fix/reSub-v2
fix/reSub-v2
26s
View workflow file
removed unused EOMES segmentation loading condition check
CI
#13:
Commit
e87fc1d
pushed by
smishra3
29s
fix/reSub-v2
fix/reSub-v2
29s
View workflow file
correct H2B segmentation loaded for localization
CI
#12:
Commit
99ed273
pushed by
smishra3
28s
fix/reSub-v2
fix/reSub-v2
28s
View workflow file
Add summary of changes to MetricComputation.md
CI
#11:
Commit
ef1379f
pushed by
smishra3
27s
fix/roof-height-classification
fix/roof-height-classification
27s
View workflow file
Update FeatureExtraction.md with algorithm details
CI
#10:
Commit
ae5089c
pushed by
smishra3
26s
fix/roof-height-classification
fix/roof-height-classification
26s
View workflow file
created FeatureExtraction.md with change summaries
CI
#9:
Commit
d7a8886
pushed by
smishra3
25s
fix/roof-height-classification
fix/roof-height-classification
25s
View workflow file
track progress of correctness checking
CI
#8:
Commit
74accf7
pushed by
smishra3
33s
fix/check_correctness_sm
fix/check_correctness_sm
33s
View workflow file
Replace point-cloud-utils with PyMeshFix for mesh hole filling
CI
#7:
Commit
3cd0c7a
pushed by
smishra3
23s
fix/roof-height-classification
fix/roof-height-classification
23s
View workflow file
Previous
1
2
3
Next
You can’t perform that action at this time.